Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5238 ATGTTCAATCTGCGACGCTCACAGTTTGTACAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTTCACATGTTGTTAAACCGGGAGAATATTAGTAATGCGGCTGTCATGATTCAGCCATCTCTAATATCATATTCATTTAATTCACTGCCTGCACCAGCATTGTTGGATGTGGCTTCCATTGCTGCAGATTGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTTATTTTTCATGGGATGACAATAGCTCAATGGTGCAACTTGGGATACCAGAACCAACCAGAACACCAGTTGCACATGGTTTCAAATTTCCATTGA 324 0.4012 MFNLRRSQFVQVFNNSPDETAYFHMLLNRENISNAAVMIQPSLISYSFNSLPAPALLDVASIAADWILLLDSYFSVVIFHGMTIAQWCNLGYQNQPEHQLHMVSNFH* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5238 107 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 100 IPR037364 -
Mal1g5238 107 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 100 - -
Mal1g5238 107 Gene3D Sec23/Sec24 helical domain 1 70 - -
Mal1g5238 107 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 41 99 IPR036180 -
Mal1g5238 107 Pfam Gelsolin repeat 50 100 IPR007123 -
Mal1g5238 107 SUPERFAMILY Helical domain of Sec23/24 1 40 IPR036175 GO:0006886|GO:0006888|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5238 Mal-Chr1 125369721 125370295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5238 K14006 - cam:101497307 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5238 1 125369721 125370295 Mal1g5238 1 125369721 125370295 ECH