Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5230 ATGGTGAATTCCATGGTTGAACGCGCCACGAGCGACATGCTCATCGGTCCCGATTGGGCTATGAATATCGAGATCTGTGACATGCTCAATCATGATCCTGGGCAAGCAAAGGACGTTGTCAAAGGTATAAAGAAGCGGATTGGAAGTAGAAATTCTAAAGTTCAACTCCTTGCACTAACTTTGCTGGAAACAATCGTAAAGAACTGTGGAGATATTGTCCACATGCATGTTGCAGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGTAAAGAAAAAGCCTGATTTTCATGTCAAAGAGAAGATACTGGTTCTTGTAGATACTTGGCAAGAAGCTTTTGGAGGACCGAGGGCAAGATATCCACAATACTATGCTGCATACCAGGAACTGCTGCGTGCCGGGGCAGTATTCCCTCAGAGATCTGAGCAATCTGCACCTGTATTCACTCCTCCCCAAACACAACCATTGACTTCATACCCTCCAAACATACGTGACGCGGATGGTCGGCCGGACACAGCTGAGACCTCTGCAGAGTCTGAATATCCAACGCTAAGTTTGACCGAAATACAGAATGCACATGGTATTATGGATGTTCTTGCCGAAATGCTCAATGCAATAGACCCTAACAACAAAGAAGGGCTTAGACAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTAGAACATACAAGCAAAGAGTGGTACACCTTGTAAACTCAACTACGGATGAATCACTACTATGCCAGGGACTAGCTCTCAATGATGATCTGCAGCGTCTACTTACCAGGCATGAATCTATTTTGTCAGGAACTTCTACTCAAAATGGAAATCAGGTAGAGAATTCAAAGCCTGCGGGACAACTTGTAGACATTGATGCTCCTCTGGTTGATACTGGAGATACTAACAAACAAACTGATGGGAGGTCCTCTTCTGGTGGTGAAGCAGGGTCCCAAACATTGAATCAGTTAATGCTTCCTGCGCCAGCTACATCCAATGGTTCAGCTGTACCTGCCAAAGTTGATCCCAAATGGGACCTGCTCAGTGGTGATAACTATGACTCACCAAAAGCAGATACTTCTCTTGCTCTTGTTCCTCTAGGAGAACAACAACCTGCCACTCCTGTATCTGATCAGAACGCCCTTGTTCTTTTTGATGTGTTTTCTAATGGAGACAATGCACCTGCGTCTGCCAATACCCAGCAACCTAATGTTGGTGGCCAATCTGGTCCATTTACTCCCCAATATCAACCACAGCAGCAGACATTCATATCTCAAGGTGGATTTTACCCCAATGGAAATGGGCCAAATGCTGCTTCACCTCAGTATGAGCAATCACTGCATACACAGAGTACAGCTCCTGCCTGGAATGGTCAGGTTGCACAACAGCAACAGCCAGCTTCCCCTTATGGTGCGCAAAATAGTGGATCATTGCCGCCACCTCCCTGGGAAGCTCAACCGGCCGACAATGGCAGTCCGGTAGCAGGTGGTCAGTATCCACAACCACCTCAGTATCCACAACCACCTCAATTCAGTCATATGGCTATGACACATGTACAGAGTGCCGCAAATCATCAGGGGCCTCAAGCAATGGGTTATGGCCAGGCTGGTGGTATGTATATGCAGCCAAATGCTAACGGCCATATGTCAGCAGTCAATAACCAGGTTGGAAGCAATCAATTAGGCATGCACCCTCAGCATATTCAAGGTGTTGCAGGGCACTACATGGGTATGGCTTCACATCAAACACAAGGTGGTCCTGCGGCTTCCATGTATCCACAACAGATGTATGGAAACCAATATGCAGGTTATGGCTATGGTCAACAACAACAACAGGGAGTTCCATACATTGAGCAGCAAATGTACGGCATGTCTGTCAGAGATGATAGTTATTTGCGAAACTCTAATCAGGTCTCTACATCTTATGTTCCATCGGGAAAGCCTTCCAAACCAGAGGATAAGTTATTTGGGGATCTTGTGGACATGGCAAAAGTGAAGCCGAAAACAAATCCAGGTCGAGCTGGTAGCATGTAA 2028 0.462 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIVKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVKEKILVLVDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLTSYPPNIRDADGRPDTAETSAESEYPTLSLTEIQNAHGIMDVLAEMLNAIDPNNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLALNDDLQRLLTRHESILSGTSTQNGNQVENSKPAGQLVDIDAPLVDTGDTNKQTDGRSSSGGEAGSQTLNQLMLPAPATSNGSAVPAKVDPKWDLLSGDNYDSPKADTSLALVPLGEQQPATPVSDQNALVLFDVFSNGDNAPASANTQQPNVGGQSGPFTPQYQPQQQTFISQGGFYPNGNGPNAASPQYEQSLHTQSTAPAWNGQVAQQQQPASPYGAQNSGSLPPPPWEAQPADNGSPVAGGQYPQPPQYPQPPQFSHMAMTHVQSAANHQGPQAMGYGQAGGMYMQPNANGHMSAVNNQVGSNQLGMHPQHIQGVAGHYMGMASHQTQGGPAASMYPQQMYGNQYAGYGYGQQQQQGVPYIEQQMYGMSVRDDSYLRNSNQVSTSYVPSGKPSKPEDKLFGDLVDMAKVKPKTNPGRAGSM* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5230 675 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Mal1g5230 675 SUPERFAMILY GAT-like domain 141 269 - -
Mal1g5230 675 PANTHER TOM1-LIKE PROTEIN 1 669 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mal1g5230 675 MobiDBLite consensus disorder prediction 297 317 - -
Mal1g5230 675 PANTHER TARGET OF MYB PROTEIN 1 1 669 - -
Mal1g5230 675 CDD VHS 2 132 - -
Mal1g5230 675 CDD GAT_GGA_like_plant 188 266 - -
Mal1g5230 675 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Mal1g5230 675 MobiDBLite consensus disorder prediction 391 472 - -
Mal1g5230 675 MobiDBLite consensus disorder prediction 267 283 - -
Mal1g5230 675 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Mal1g5230 675 MobiDBLite consensus disorder prediction 142 180 - -
Mal1g5230 675 Gene3D - 182 275 IPR038425 -
Mal1g5230 675 Gene3D - 1 138 IPR008942 -
Mal1g5230 675 MobiDBLite consensus disorder prediction 267 317 - -
Mal1g5230 675 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Mal1g5230 675 MobiDBLite consensus disorder prediction 391 508 - -
Mal1g5230 675 Pfam GAT domain 196 269 IPR004152 GO:0035091|GO:0043130
Mal1g5230 675 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5230 Mal-Chr1 125175501 125186897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5230 - - gmx:100809022 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5230 1 125175501 125186897 Mal1g5230 1 125175501 125186897 ECH
Mal2g0702 2 8239357 8247049 Mal1g5230 1 125175501 125186897 PCT