Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5099 ATGGAAGTTTCTTCTTCTTCGGCTGAATTCGATTACTTGTTCAAGCTTCTTATGATTGGTGATTCTGGAGTTGGAAAAAGCACGCTTCTTCTCAGATTCACTTCTGATAATTTCGAGGATCTTTCTCCCACCATTGGTGTAGACTTCAAAGTTAAATATGTTACACTTGGTGGAAAAAAGTTAAAACTTGCTATTTGGGACACAGCTGGACAGGAAAGGTTTAGAACACTTACTGGTTCATATTATAGAGGTGCACAAGGAATAATTATGGTATATGACGTAACGCGACGTGAAACTTTTACAAATCTATCTGATATATGGGCTAAAGAAATTGACTTATACTCAACAAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGACAAGGAAAGTGAAAGGAAAGTTACCAAAAAGGAAGCGGTGGACTTTGCAAGGCAATATGGGTGCCTCTATACTGAATGCAGTGCAAAAACTCGAGTAAATGTTGAGCAGTGTTTTGAGGAGCTTGTAATGAAGGTTTTGGATACACCAAGCCTCTTGGCTGAGGGCTCATCTGGTGTGAAAAAGAACATCTTCAAGCAGAAACCCCAAGAGTCTGATGCGTCAACTAGTAGCTGTTGCTCATGGTGA 636 0.3947 MEVSSSSAEFDYLFKLLMIGDSGVGKSTLLLRFTSDNFEDLSPTIGVDFKVKYVTLGGKKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERKVTKKEAVDFARQYGCLYTECSAKTRVNVEQCFEELVMKVLDTPSLLAEGSSGVKKNIFKQKPQESDASTSSCCSW* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5099 211 ProSitePatterns Sigma-54 interaction domain ATP-binding region A signature. 16 29 IPR025662 -
Mal1g5099 211 ProSiteProfiles small GTPase Rab1 family profile. 9 209 - -
Mal1g5099 211 PANTHER BNAA05G18680D PROTEIN 2 210 - -
Mal1g5099 211 SMART rho_sub_3 16 178 IPR001806 GO:0003924|GO:0005525
Mal1g5099 211 SMART arf_sub_2 1 179 - -
Mal1g5099 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 180 IPR027417 -
Mal1g5099 211 SMART ras_sub_4 11 178 - -
Mal1g5099 211 SMART rab_sub_5 14 178 - -
Mal1g5099 211 Gene3D - 7 209 IPR027417 -
Mal1g5099 211 ProSiteProfiles small GTPase Rho family profile. 7 176 - -
Mal1g5099 211 Pfam Ras family 15 176 IPR001806 GO:0003924|GO:0005525
Mal1g5099 211 PANTHER LD21953P-RELATED 2 210 - -
Mal1g5099 211 ProSiteProfiles small GTPase Ras family profile. 5 211 IPR001806 GO:0003924|GO:0005525
Mal1g5099 211 PRINTS Transforming protein P21 ras signature 14 35 - -
Mal1g5099 211 PRINTS Transforming protein P21 ras signature 54 76 - -
Mal1g5099 211 PRINTS Transforming protein P21 ras signature 118 131 - -
Mal1g5099 211 PRINTS Transforming protein P21 ras signature 36 52 - -
Mal1g5099 211 PRINTS Transforming protein P21 ras signature 153 175 - -
Mal1g5099 211 SMART ran_sub_2 19 211 - -
Mal1g5099 211 CDD Rab18 14 175 - -
Mal1g5099 211 TIGRFAM small_GTP: small GTP-binding protein domain 12 170 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5099 Mal-Chr1 122615739 122620763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5099 15 168 EF-hand Containing Proteins AT5G27540 24.051 4.48e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5099 K07910 - gmx:121173094 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5099 1 122615739 122620763 Mal1g5099 1 122615739 122620763 ECH