Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5081 ATGAAAGTAACATGGAAGAACACCACGAAGAAGAAGAAACCTTCTTTACCGGTCTTATCACACTTCACTGATCAACCCAATTCACACCCTGCCGAAGATGATTGTGATGGAAGAACAGTTCATTCTCCCAATTCCGACCAATCAGCACAATTGGCTAAGCAATTTCAAGCTCAAGGAGACAACCTTGCTACGGAGGGAAAGTATAGGGAAGCACTGGGTAAATGGGAAGCTGCTCTTACATTGGCCCCTGATGTTCCAGCTTTGCATGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGATGCTTGGAATGCTTTAAAGGCTGCAAGTCGAGCTACTGAATTGAAACCATCGTGGGCCGAGGCTTGGGTCACACTTGGCAGATCACAGCTGAATTATGGCGAGCCAGATAATGCTATTGAAAGCTTTGACAGAGCTTTAGCTTTCAAGCCTGATTATGAAGAAGCACAAGATGATAGAAAAACTGCATTACGTCTTATAAAGAAGAGAAAGCAACTTCATTCATCAGGCTTGAGTGACATTCAAAATCGATACACCGTAGGTGATAAGAATGAAAGCTCATGA 585 0.4291 MKVTWKNTTKKKKPSLPVLSHFTDQPNSHPAEDDCDGRTVHSPNSDQSAQLAKQFQAQGDNLATEGKYREALGKWEAALTLAPDVPALHEQKAQVLLEIGDAWNALKAASRATELKPSWAEAWVTLGRSQLNYGEPDNAIESFDRALAFKPDYEEAQDDRKTALRLIKKRKQLHSSGLSDIQNRYTVGDKNESS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5081 194 SUPERFAMILY TPR-like 50 171 IPR011990 GO:0005515
Mal1g5081 194 MobiDBLite consensus disorder prediction 10 26 - -
Mal1g5081 194 PANTHER OSMOSIS RESPONSIVE FACTOR 1 192 - -
Mal1g5081 194 MobiDBLite consensus disorder prediction 1 53 - -
Mal1g5081 194 SMART tpr_5 52 85 IPR019734 GO:0005515
Mal1g5081 194 SMART tpr_5 120 153 IPR019734 GO:0005515
Mal1g5081 194 SMART tpr_5 86 119 IPR019734 GO:0005515
Mal1g5081 194 ProSiteProfiles TPR repeat profile. 120 153 IPR019734 GO:0005515
Mal1g5081 194 Pfam Tetratricopeptide repeat 92 153 - -
Mal1g5081 194 ProSiteProfiles TPR repeat region circular profile. 120 152 - -
Mal1g5081 194 Gene3D Tetratricopeptide repeat domain 42 185 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5081 Mal-Chr1 122358287 122362177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5081 59 164 EF-hand Containing Proteins AT2G32450 32.075 8.08e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5081 - - pvu:PHAVU_001G066600g 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5081 1 122358287 122362177 Mal1g5081 1 122358287 122362177 ECH