Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5062 ATGAATGCCATAGCTACTGCTTCTGCTCTATCTCTTCCTATCTTTTGTAGAACTTCCAAGCTTGACACCAAAAGGGGTTTGAAAGGTAAATTTGGAGTGTTTGCTGTGTTTGGAGAAGCAGACAAGAAAAGTGCATGGGGTGCGATATTTGATGTACAAGATCCAAGATCTAAAGCACCGCTAAGTAAAGGGAAAGTTTTGGATGTATTTCAAGCCATAGAAGTGGCTAGGCATGATATTGAGTACTTAGATTGGCGAGCTCGGCAAGATGTGCTTACCATCATGCTCCTCCATGAAAAGGTGGTTGAAGTTCTTAATCCTCTAGCTCGTGAATTTAAGTCGATTGGCACCATGAAAAAGGATCTAGCTGGGTTGCAGGACGAATTAGCAGAAGCACACAGACAGGTCCATATATCTGAAGCAAGAGTTTCCACTGCTTTAGATAAACTCGCATACATGGAAGAATTGGTAAATGACAAGCTATTGCAAGACAGAAGCACAGCTGAAGTTGCCGAGACATCGTCTTCTCCAAGTACTTCTGAAAAATCTGTACATACTGAAAGAAGAAGGAAGCCGAAGAAAAGCTTGAATGTATCAGGTCCAGTTCAGTCATACCATCCTAACTTAAAGAATTTCTGGTATCCGGTTGCTTTCTCTGCTGACTTAAAGGATGATTCCATGATTCCAATGGAATGTTTTGAGGAACCATGGGTTATCTTTAGGGGTAAAGATGGCAAACCTGGATGTGTCCAAAATACATGTGCACACAGAGCATGTCCCCTTCACCTTGGTTCTGTAAATGAGGGTCGTATCGCATGCCCCTACCACGGCTGGGAATATACGACTGACGGAAAATGCGAGAAAATGCCATCTACTCGATTGCTAAATGTAAAGATAAAGTCAATTCCATGTTTTGAGAAAGAAGGGATGATCTGGATTTGGCCTGGCAGTGATCCCCCAGCAGCCACACTTCCATCTTTACTACCTCCTTCTGGATTTGTAATCCATGCCGAGATTGTCATGGAGCTTCCAGTTGAACATGGATTACTTTTAGACAACCTTTTGGATCTTGCGCACGCCCCTTTTACTCATACTTCAACATTTGCCAAGGGATGGAGTGTTCCCAGCTTTGTGAATTTTTTGACACCTGCATCTGGTCTGCAAGGATATTGGGATCCCTATCCGATTGATATGGAGTTTCGACCACCTTGTATGGTTCTATCAACCATCGGAATTTCGAAGCCCGGGAAACTGGAAGGACAAAGCACCAAAGAATGTTCAACTCACCTGCACCAACTGCATGTCTGCTTACCCTCTTCAAAAGATAAAACAAGATTGCTATATAGAATGTCACTGGATTTCGCTCCCCTTCTTAAGCATATGCCTTTTATGGAACATCTATGGAGGCATTTTGCAGAACAGGTTTTAAACGAGGATCTACGGCTAGTGGTTGGTCAACAAGAGAGAATGAATAAAGGTGCAAATGTATGGAATGTGCCAGTTACCTATGACAAGCTGGGAGTAAGGTATAGGCTTTGGAGGGATGCATTGGAAAAGGGAGCTAAGCAACTACCCTTCAACACACATAATAATTAA 1596 0.4279 MNAIATASALSLPIFCRTSKLDTKRGLKGKFGVFAVFGEADKKSAWGAIFDVQDPRSKAPLSKGKVLDVFQAIEVARHDIEYLDWRARQDVLTIMLLHEKVVEVLNPLAREFKSIGTMKKDLAGLQDELAEAHRQVHISEARVSTALDKLAYMEELVNDKLLQDRSTAEVAETSSSPSTSEKSVHTERRRKPKKSLNVSGPVQSYHPNLKNFWYPVAFSADLKDDSMIPMECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIACPYHGWEYTTDGKCEKMPSTRLLNVKIKSIPCFEKEGMIWIWPGSDPPAATLPSLLPPSGFVIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKECSTHLHQLHVCLPSSKDKTRLLYRMSLDFAPLLKHMPFMEHLWRHFAEQVLNEDLRLVVGQQERMNKGANVWNVPVTYDKLGVRYRLWRDALEKGAKQLPFNTHNN* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5062 531 Pfam Vanillate O-demethylase oxygenase C-terminal domain 346 370 IPR044043 GO:0016491
Mal1g5062 531 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 69 527 - -
Mal1g5062 531 MobiDBLite consensus disorder prediction 167 202 - -
Mal1g5062 531 SUPERFAMILY Bet v1-like 309 520 - -
Mal1g5062 531 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 254 276 IPR015881 GO:0005506|GO:0051537
Mal1g5062 531 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 213 313 IPR017941 GO:0051537
Mal1g5062 531 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 69 527 - -
Mal1g5062 531 SUPERFAMILY ISP domain 208 317 IPR036922 GO:0051537
Mal1g5062 531 Pfam Pheophorbide a oxygenase 400 495 IPR013626 GO:0010277
Mal1g5062 531 Gene3D - 336 524 - -
Mal1g5062 531 MobiDBLite consensus disorder prediction 167 181 - -
Mal1g5062 531 Coils Coil 115 142 - -
Mal1g5062 531 Gene3D - 207 330 IPR036922 GO:0051537
Mal1g5062 531 Pfam Rieske [2Fe-2S] domain 213 294 IPR017941 GO:0051537
Mal1g5062 531 CDD Rieske_RO_Alpha_Cao 196 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5062 Mal-Chr1 121776919 121781849 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5062 K13600 - gmx:100805998 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5062 1 121776919 121781849 Mal1g5062 1 121776919 121781849 ECH