Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2892 ATGAAGATGGCTGGTTCCACCTTCTCTTACTCTTCTCCTTCTCTTTCCTCTATCTCCAAATCCACCTTTCATTCTCTTCCATCCACTCTTATCTCCAACCACTTCCCCTCAAAACTTGCCACTTCATCACCATGCTCTCTAAAAAAGATCAAAGCCTTGGGAATTCAGCAAACAGGTTCCACTCCACATGGAGACAACCTTGATTCAGTCAAGAGTAGGATTGTGCTCCAGATGTTTCAAAGGGCAATGCCAATGGAACCTCTTATAACCATTTTCACAAAACAATCCGAGAAAATGGCAAATGTTGTTTGGAGAGTAGATCAGATGGAGGATATTCAGATTACAAGAGTGAATGACTTTACGTTGGAAAATCTTCAAGATTGGAGAAAGTCATCCAAATGGGTTTCCGCATTCTTATTTGGACAAACCATATCAGTTATTTCACCTGATGTTTCATACGCAAGTGACTCAGTGAAGATAAATGAGATGTATCAGGTTGGGGAGTTGTTTGACTTAGGAATCCAACTAATATATTTGCTACTGCTGTTGGGTTTGCTTGGGGCTGGAACTTACTATGTGATTCGCCAAGTTCTTGTCCGCAGAGAACTTGACCTTTCTGCCAAAGAGTTGCAGGAGCAAGTCAGAAGCGGTGATGCAAATGCGACTGAGCTGTTTGAGCTTGGTGCAGTTATGCTGCGGAGGAAATTTTACCCAGCTGCTACCAAGTTCTTGCTTCAAGCAATTGAGAAATGGGATGGAGAAAACCAGGATCTTGCCCAGGTTTACAACGCTCTTGGTGTAAGTTATGTTCGCGATGGGAAGCTTGAAAAAGGAATTGCTCAATTTGAGACAGCTGTGAAGATTCAACCAGGCTATGTCACAGCATGGAACAATCTTGGTGATGCATACGAAAGTAAAAAAGAATATCCGTCTGCTCTGAAGGCATTTGAAGAAGTGCTTCTATTTGATCCTAACAACAAGATTGCACGGCCTAGGAGAGATGCTTTGAAGGAACTTGTTGGAATGTCCCAAGGAGTTACTGTCAGATATAGAGAGAAGAAATGA 1065 0.4225 MKMAGSTFSYSSPSLSSISKSTFHSLPSTLISNHFPSKLATSSPCSLKKIKALGIQQTGSTPHGDNLDSVKSRIVLQMFQRAMPMEPLITIFTKQSEKMANVVWRVDQMEDIQITRVNDFTLENLQDWRKSSKWVSAFLFGQTISVISPDVSYASDSVKINEMYQVGELFDLGIQLIYLLLLLGLLGAGTYYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIEKWDGENQDLAQVYNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKEYPSALKAFEEVLLFDPNNKIARPRRDALKELVGMSQGVTVRYREKK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2892 354 ProSiteProfiles TPR repeat region circular profile. 293 326 - -
Mal1g2892 354 ProSiteProfiles TPR repeat profile. 293 326 IPR019734 GO:0005515
Mal1g2892 354 Pfam Tetratricopeptide repeat 264 323 - -
Mal1g2892 354 ProSiteProfiles TPR repeat profile. 259 292 IPR019734 GO:0005515
Mal1g2892 354 PANTHER TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC 19 347 - -
Mal1g2892 354 SMART tpr_5 293 326 IPR019734 GO:0005515
Mal1g2892 354 SMART tpr_5 259 292 IPR019734 GO:0005515
Mal1g2892 354 Gene3D Tetratricopeptide repeat domain 197 344 IPR011990 GO:0005515
Mal1g2892 354 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 19 347 - -
Mal1g2892 354 SUPERFAMILY TPR-like 217 331 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2892 204 324 Glycosyltransferase AT3G11540 29.032 2.60e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2892 - - ahf:112712552 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2892 1 41374516 41378026 Mal1g2892 1 41374516 41378026 ECH