Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2527 ATGGCCACAACCGCCGTAGGAGCAGCAGCATTTCTCCTGCTGCTACTTCTCCCTTTCTCCATCTCCATCTCTCAACCGATCTCCGATTCTCACCGATCCGCCGCTTCCAATCTCTTCACCCAAATCTCTCCCAGTTTAGAAGATGCGTATGAGGCACTGAGAGTTTTTGAGATTCTATCAATTGAGAAGAAGCCTATTGTTACCAAAGACACTTGTGGTAAAGTGTTGGAAAATCTAGGTTCATCTTCTTCTCCTCTTAAGGATGTTTTCTATGCGTTGAAAGTTAATGGGATATTAAAATGCAATGTTGATGATGCTGTTTTCAAGGGTATTGCCTCAAGACTTAAAGCCACCGTCAATGATGCAAGTAATTTGCTTGACATATACTACTCAGTAGGAAGTTTGGTTCTTATCAAGGATCAGGCTTCTAATGTTGATGTTCTTCTTACTGATGCTAATGGCGTTTTTCATTCAATCAAGGCTCTAAGCCAAAGTGATGGAAGATGGCGCTACAGCTCCGATAATCCAGAGTCTAGTATCCATGCTGCTGGATTAGCACTTGAAGCGCTTGCTGGAGTGATTTCACTAGCATCTTCTGAAATTGATCAGAGTAAGGTCAGTATAGTAAACAATGGTATAGTGAAGCTTTTCGACAGCATTGAGAAATATGATGATGGAGCATTTTATTTTGATGAGAAAATTGTTAGAGGATCTGAGCATCAAGGTTCTCTTTCCACGTCTTCTTCAGTTGTTCGAGGGGTTACTGCATTTGCTGCAGTAACGTCTGGGAAAATAAATGTTCAAGGGGATATAATATTGGGCTTAGCAAAGTTTTTCCTCGGCATTGGAATCCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTATCCTTTTTAGAGAGCAACAGGATTTCCATTCCTTTGATATTGTCACTTCCTGAAACAGTTTATTCATTGACCAAAAAAGGGCAGCTTAAGGTCAAGGTCAATACAGTGCTTGGTTCAGCTGCACCACCTCTGACAGTTAAGCTTGTCCGAGCTTTTAGCACCGGTGCAAAAGATTCAGCTATTATTGAAAGCAAGGAGCTTCAGTATGACCAAAAAAGTGGATTTCATTCCTTGGATTCCTTCCCAAAAAATGTTGATGTGGGAACATATGTTTTTGTTTTGGAGATTGTGCTACATGATTCTGAAAGTGACAAAGTTTATGCTACTGGGGGCCAAATTCATGTGCCAATATATGTCACGGGCATTATTAAAGTTGGCAGTGCAGAAATAGCAGTTCTGGACAGTGATCTTGGAAATGTTGAAACCCATAAGACGCTAGATTTGGCTGGAAATGATGTTGTTTCACTCTCTGCTACCCACCTTCAAAAGTTGAGGCTTTCTTTCCAATTGGAAACACCTTATGGTCATGTTTTCAAGCCTCACCAGGCATTTTTAACATTGAGACATGAAACAAAGATTGAACACGTGTTTTTGGTTGGAAATACTGGCAAGAAATTTGAGAATAAATTTGATTTTCTTGGCTTGGTGGAAAAACTTTTTTATCTCTCTGGCAAATATGACATTGAGCTGACTGTTGGTGATGCCGTCATGGAGAACTCTTTCTCACGACTACTGGGCCATGTCGAATTAGATCTTCCAGAAGCTCCTGAAAAAGCAGCACGTCCTCCTGCACCACCTGTTGATCCTTACTCAAGATATGGCCCCAAAGCGGAGATTAATCACATATTCAGGGCTCCTGAAAAGCGACCACCCCAGAAACTATCTCTCGTGTTTTTGGGTTTGATCCTTCTGCCATTCATTGGCTTTTTGGTTGGGTTGTTACGATTGGGGGTGAACCTGAAGAATTTCCCTAGTTCAACAGTACCTGCTACATTTGCCACCCTTTTCCATCTTGGTCTTGCTGCAATTCTGTTGCTTTATGTACTTTTCTGGTTGAAGCTGGACCTATTTACCACACTCAAAACACTTGGTCTTTTGGGAGCTTTTACGATGATTATTGGACACAGGATTCTTTCCCATCTTGCTTCAACATCGACCAAGTTGAAATCAGCATGA 2070 0.4135 MATTAVGAAAFLLLLLLPFSISISQPISDSHRSAASNLFTQISPSLEDAYEALRVFEILSIEKKPIVTKDTCGKVLENLGSSSSPLKDVFYALKVNGILKCNVDDAVFKGIASRLKATVNDASNLLDIYYSVGSLVLIKDQASNVDVLLTDANGVFHSIKALSQSDGRWRYSSDNPESSIHAAGLALEALAGVISLASSEIDQSKVSIVNNGIVKLFDSIEKYDDGAFYFDEKIVRGSEHQGSLSTSSSVVRGVTAFAAVTSGKINVQGDIILGLAKFFLGIGIPGDAKDFFNQVESLSFLESNRISIPLILSLPETVYSLTKKGQLKVKVNTVLGSAAPPLTVKLVRAFSTGAKDSAIIESKELQYDQKSGFHSLDSFPKNVDVGTYVFVLEIVLHDSESDKVYATGGQIHVPIYVTGIIKVGSAEIAVLDSDLGNVETHKTLDLAGNDVVSLSATHLQKLRLSFQLETPYGHVFKPHQAFLTLRHETKIEHVFLVGNTGKKFENKFDFLGLVEKLFYLSGKYDIELTVGDAVMENSFSRLLGHVELDLPEAPEKAARPPAPPVDPYSRYGPKAEINHIFRAPEKRPPQKLSLVFLGLILLPFIGFLVGLLRLGVNLKNFPSSTVPATFATLFHLGLAAILLLYVLFWLKLDLFTTLKTLGLLGAFTMIIGHRILSHLASTSTKLKSA* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2527 689 PANTHER RIBOPHORIN II 12 689 IPR008814 GO:0006487|GO:0008250|GO:0016021
Mal1g2527 689 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 12 689 - -
Mal1g2527 689 Pfam Oligosaccharyltransferase subunit Ribophorin II 12 681 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2527 Mal-Chr1 34949586 34958228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2527 K12667 - gmx:100814831 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2527 1 34949586 34958228 Mal1g2527 1 34949586 34958228 ECH
Mal3g3867 3 116573328 116581117 Mal1g2527 1 34949586 34958228 PCT