Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2425 ATGGCAACCATCTCAGCTACCACCACAACTGCATCGATCACCCGTGCATGTCTTGCACAAAAGCGACCTCTTGCACTCTCATCCTCTCCTGTTCTTGGATTGCCAACAATGGCTAAGGTTGGAAGAGTGAGGTGTTCAATGGAAGGAAAGCCTTCTTCTGTGAATGAAAGCAGCTCAAACATTGGAATGGGGTCATCTTTGTTTGCAGCTGCATGTGCTGCAGCTATGTCAAGCCCAGCAGCCATGGCATTGGTTGATGAAAGAATGAGTACTGAAGGAACTGGACTTCCATTTGGACTCAGCAACAACCTTCTTGGTTGGATCCTTTTTGGTGTGTTTGGTCTTATTTGGGCTCTCTATTTTATTTACGCTTCAAGTCTTGAAGAGGATGAAGAGTCAGGATTGTCTCTTTAA 414 0.4541 MATISATTTTASITRACLAQKRPLALSSSPVLGLPTMAKVGRVRCSMEGKPSSVNESSSNIGMGSSLFAAACAAAMSSPAAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFIYASSLEEDEESGLSL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2425 137 Pfam Photosystem II reaction centre W protein (PsbW) 1 137 IPR009806 GO:0009507|GO:0009523|GO:0015979
Mal1g2425 137 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 137 IPR009806 GO:0009507|GO:0009523|GO:0015979
Mal1g2425 137 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2425 Mal-Chr1 32728044 32729175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2425 K02721 - gmx:100305788 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2425 1 32728044 32729175 Mal1g2425 1 32728044 32729175 ECH
Mal3g3807 3 115725385 115725884 Mal1g2425 1 32728044 32729175 PCT