Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2380 ATGGCGGCTCGGTCTCATGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCCAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGATATGGATGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGACTCCTTTGCCAGGAGAGCAGAAATGTACTATAAAAAACGTCCCGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGGGCATTGGCGGAGAGATATGATCATGCAACTGGAGTCATCCGCCATGCCCATCGGACCATGGCTGAAGCATTTCCTAATCAAATTCCAATGATGATCACAGATGATTTATCTGCGGTTCCTTCTATGGAGACTGAGCCACGTACTCCAGAAACGCGTCACCCTTCACGTTCATTTCTTGACTCAGATGAATCAGAAAAGGACGCTCATGTTATCAAAAGAAATGGAGCGAATAGTGAAGAACCTAATTCTGCTTTGAACAAAACAGGTTTAAGACAGCTCAATGATCTCCTCATCCCTCAAGAGCATGCAAAGTTTGCAGAAGGGCATGCTAGAAGGGGTCTCAATTTTTTAGAGGCGCAGGAGGTGAGTAGTGAGCCAAACAATGGAATCCATGGCACTAAGGCTCAAGTTGTATCTGAGTCTGAATGCGTGACAAAAGCCGAAGCAGAAATTTCGGCCTTAAAGAAAGCCCTTGCCAAATTCGAAGATGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAGAGTTTAGAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTCTGCACAAGAGAATTCTCAAAGACTCGATGAACGAGCAAGCAAAGCAGAGGCGGAAGTTCAAGACTTGAAGGAAGCGGTAATCAAATTACAGGCTGAAAGGGAAGCTACTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACCGATCTTGAGAAAAATATTTCTTTTGCTCAAAAGGACGCAGGAGAGTTTAACGAACGTGCTACTAGAGCTGAAACTGAAGTTGAGTCCTTGAAGCAGGATCTCGTTCAAGTAGAAGCTGAAAAGGAAGCCGCCCTTGTTCAATATAGACAGTGCTTGGAGACCTTATCAAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAACGTTAGAAGGATTAATGAGCAAGCTAATTTAGCTGAAAATGAAATTGAAGCTTTGAAGTTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTATCCGATATCAGCAATGCTTGGAGATAATTTCCAGTTTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAACTTCTAAGATAGACGATGAGGTTGAAAAGTTGCATAGTTCCGAACAGAAGTGTCTCTTTTTGGAAACATCGAATCACACTCTACAGTCTGAATTACAGTCTTTGGCACAAAAGATGGGATCTCAAAGTGAAGAACTTAACGAGAAGCAGAGAGAATTGGGTAAACTTTGGAGTTCCTTACAAGAGGAGAGACTGAGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGACCTTAGAGCTCTTGCTGCTGATTTTCGCAATAAAGCAGAAATACTCGGGAATGTGGAATCACGTAAACAGGCTCTAGAAGATGAAGTGCACCGAGTCAATGAGGAAAACAAAATTCTAAATGAGCACAAAATTTCTTCATCTTTATCTATAAAAACTTTGCAGGATGAGATGTTGAATTTGAAAGAGACAATAGAGAAACTTGAACAAGAGGTTGAGCTGCGACTTAATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGTTTAATGAAATGAATAAAAGACACGAAGTTATGATGGACGAGGTCCGGTCAACTGACTTAGACCCGCTGTGCTTTGGTGCATCTGTGAAAAAATTGCAAGACGAGAACTCAAAGCTGAAAGAAACATGTGAGGCTGACAAAGATGAGAAAGCAGCTCTTTTGGTGAAATTGGAAACCATGGAAAATCTTTTGGAGAAAAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAGTTGGATAGTGTTAGAGGAAAGGTAAATGCGTTGGAAGAAACATGCCAGTCTTTGCTTGAGGAGAAATCGATTCTTGCTGATGAGAAGGCCGACTTGTTTTCTCAATTACAAGCCGCAACTGAAAAGCTGGAGAAGCTCTCAGAAAATAACAACCTTTTGGAAAATTCACTATTTGATGTCAATGCTGAACTTGATCGATTAAGGGGAAAGTCCAAAATCTTAGAAGACACGTGCCAGTTACTTGACCATGAGAAGTCCAGTATCTTTTCGGAGAAAGAAGCCTTAGTTTCGCAGTTGAACGCCACTCACCAAATGCTGAAAGACCTTGAAAAGCAACACAATGAATTAGAAGTCATGCATTTGGAACTAAAAGGAGAAAGGGAGTCTGCACTTAAAAAGGTAGAAGAGCTATTGGTTTCCCTGTATTGTGAAAGGGAAGAACATTGCAGAGTTTTGAAGTTGAATGAAGATGAAGTGGTGAACAAGGAATTACAAATTCATACTCTGCAAGAAGATGCAAAGTGCCGGAAAGAAGAATATGAGGAGGAACTTGATAGAGCTATGAATTCACAAATTGAAATTTTCATCTTGCAGAAGTTTATCCAAGATTTGGAGAAAAAGAACTTTTCCCTTCTAGTTGAATGCCAGAGACTTTTGGAGGCGTCCAAAATGTCTGACAAAATGATTTCTAAATTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTTTGTCTGAGAAAATTAAAATACTAAGGATTGGGCTGCTTCAGGTGTTGAAGACTCTTGACATTCACGGCGAGAATTTCTTTGAAGATATGCTTGACGAAGACCAAACACTCCTGAACCATATACATGGAAAACTTAAGGAGAGAAAAAAGTATTTTGACACAATTTTCAAGGAATGCCACCACTTGGCCGTTGAGAATTCGGTTCTGATTACATTTCTTGAGCAGTTGAAACTGAAGGTAGAAAATCTTTTGATAGAAAAAGGAGCACTTGATGAGGAGTCCAGGATACAGTCTAAGCAGTTCAGGGCATTGCAAATAGAGTTCCAAAAGGCATTGGAAAAGAATCAGGAGTTGAAGTTGACAATAAGCAAAGGAGAAGATAGAATGGTAGGAATGACAACTGAAATAGAGAATCTACGCAAAGAGCTATCAGACTTTGTAAAGAGCCACAGAAACTTACAGGAGGAAAGTTGCACGATACTTGAAGAGAAAACATCTTTGATGGGAAGATTTAAAGATCTGAGTGAGGAAAAGGGTAACTTAGAAGAAGAAATTTGTGTCCTGTCCCATGAATCATTAGTTCAATCTAATATTTCTGTGGTTTACCAGAGTATTATCTTTGAAAAACTCCTGGAACTTAAACAGCTTGGCCAAGAACTTGATAAGCTTTGTTCGGAAAACAATAACCTTGAGGAGAGATTGAATATAATGGCGCACAAATTAGAAAATGCAGAAATGGAAAATTCTCATCTTAAAGAGTTCTTTGTAAAGTCAAATGTTGAATTGAATTTAGTTGAATCTGTCAATGATCATTTGACTTGTCAGATTAGGAATGAAAAGGAAATGTTGTGTCAAAAGGAAAAAGTGCTTTCGGAAGCAGCCAAGACGTTTCATGCTTTACACACTGAGAAAACAGAATTGCAAAGTTCGGCAGAAGATCTGAAGATTAGATATGATGATGCCAAGGGGAAACTTGAAGAGCAAGCTGATCAAATTTTCAAATTGTCCTCAGACAGGGATCGTCAAAATAAAGAGCTTGGATGCCTTAGTGAAGTGAAGCAGAAGTTGGAGTCTGAAATGAAGTGCCTACACCAAGAACTTGAAGAAACTAAGCTGAGGGAAGAGAAGCTAAGTTATGAAGTACATCAAGGAATAAATGAGATTGAACAATGGGAAGCTCAGGCTGCAGCAATCTACGCTGAACTGCAGATTTCTGCGGTCAATGAAACGCTATTTGAAGGGAAGGCCTGTGAGCTAGCTGATACCTGTGAGCATCTTGAGCGCATAAACCACTCGAACGACATGGAAAGAGAACATCTGAAAGAATTGGTTGGTAAGTTGGAAGGTGAAAATGGGAGAATGTGTGATCAATTAGCTGCTTATGTCCCAGCTATCAGTGCTTTGAATGATTGTGTAACATCTCTGGAGATGCAGACTCTTGGACATGTAAAACGTCATGACTATGAAAAACCAGAGGTAAAAAATTTGGTGAATCACCAATACAATGAAAATGGTCAACAAACAGATGAAGATCAGACTGTTACAGCACCAGATCCTCTCCTTGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCAGTTAAGAAGTTTAATGGAAGTTCCAAACCCAAGGATGAAATGAGAGAGATTCAAGAAGCAAAGGAGATTGAACAGAAGATGGGGAATTTAAGGCCCGATAATCCTGTAACTGAGATTGAAGTACTGCCAAAAGACATTATGCTTGATCAAATATCTGAATGTTCATCATATGGAATAAGCAGGAGAGGAACTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACATCTGATAAGACACAGAAGATGGCGGCAGAACCGGCAGAAGATCATCATCAAAGAGGAGCAGCCAAGGAAATCTACAACAAACATCCGTCAGGAGATTCCTTGGTGGAAAAGGAGTTGAGGGTGGACAAGTTAGAGATCTCAAGAAGAATGTCACGGCCACGTGAAGAAGGCAACAAGAGCAGGGTTTTGGAAAGACTTGATTCTGATGCACAAAAGTTAACAAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTGGAAACTGCGGAGAAGAGTACAAAAGGAAAAAGTACCGAGTATGATACGGTTAAAGGGCAGCTTGAAGCGGCTCAGGAGACTGTCACAAAGTTGTTCGATGCCAACTGCAAGCTGATGAAGAATGTAGAAGAGGGTGCATTGTCTTCAGCAGGGAATGCTTCAGCAGAGTCAGATGAGATTGGAAGTGTCAGCAGGAGGAGAGTTTCGGACCAGGCGCAGAGAGGATCAGAAAAAATAGGACAACTTCAGTTGGAAGTTCAAAGACTGCAGTTTCTTCTTTTGAAACTCAATGATGGAAAAGAAAGCAAAGAGAAAACTAGAATGGCTGAGCAAAGTCGGAGAGTACGTTTGCGGGATTATCTCTATGGTGCGACAAGAACCAACCACCAAAAGAAGAAAAAAACACCTTTTTGTGCATGTGTAAGACCACCCACCAAGGAAGATTGA 5388 0.4022 MAARSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPMMITDDLSAVPSMETEPRTPETRHPSRSFLDSDESEKDAHVIKRNGANSEEPNSALNKTGLRQLNDLLIPQEHAKFAEGHARRGLNFLEAQEVSSEPNNGIHGTKAQVVSESECVTKAEAEISALKKALAKFEDEKEAGLLQYQQSLEKLSNLELEVSSAQENSQRLDERASKAEAEVQDLKEAVIKLQAEREATLLQYQECLEKITDLEKNISFAQKDAGEFNERATRAETEVESLKQDLVQVEAEKEAALVQYRQCLETLSKLEERLKESEENVRRINEQANLAENEIEALKLEVTKLNEEKEDAAIRYQQCLEIISSLEHKLSCAEEEVRRLTSKIDDEVEKLHSSEQKCLFLETSNHTLQSELQSLAQKMGSQSEELNEKQRELGKLWSSLQEERLRFIEAETAFQTLQHLHSQSQEDLRALAADFRNKAEILGNVESRKQALEDEVHRVNEENKILNEHKISSSLSIKTLQDEMLNLKETIEKLEQEVELRLNERNALQQEIYCLKEEFNEMNKRHEVMMDEVRSTDLDPLCFGASVKKLQDENSKLKETCEADKDEKAALLVKLETMENLLEKNSVLENSISDLNAELDSVRGKVNALEETCQSLLEEKSILADEKADLFSQLQAATEKLEKLSENNNLLENSLFDVNAELDRLRGKSKILEDTCQLLDHEKSSIFSEKEALVSQLNATHQMLKDLEKQHNELEVMHLELKGERESALKKVEELLVSLYCEREEHCRVLKLNEDEVVNKELQIHTLQEDAKCRKEEYEEELDRAMNSQIEIFILQKFIQDLEKKNFSLLVECQRLLEASKMSDKMISKLETENIQKQDDVDSLSEKIKILRIGLLQVLKTLDIHGENFFEDMLDEDQTLLNHIHGKLKERKKYFDTIFKECHHLAVENSVLITFLEQLKLKVENLLIEKGALDEESRIQSKQFRALQIEFQKALEKNQELKLTISKGEDRMVGMTTEIENLRKELSDFVKSHRNLQEESCTILEEKTSLMGRFKDLSEEKGNLEEEICVLSHESLVQSNISVVYQSIIFEKLLELKQLGQELDKLCSENNNLEERLNIMAHKLENAEMENSHLKEFFVKSNVELNLVESVNDHLTCQIRNEKEMLCQKEKVLSEAAKTFHALHTEKTELQSSAEDLKIRYDDAKGKLEEQADQIFKLSSDRDRQNKELGCLSEVKQKLESEMKCLHQELEETKLREEKLSYEVHQGINEIEQWEAQAAAIYAELQISAVNETLFEGKACELADTCEHLERINHSNDMEREHLKELVGKLEGENGRMCDQLAAYVPAISALNDCVTSLEMQTLGHVKRHDYEKPEVKNLVNHQYNENGQQTDEDQTVTAPDPLLDFQDLQRRINEISMAVKKFNGSSKPKDEMREIQEAKEIEQKMGNLRPDNPVTEIEVLPKDIMLDQISECSSYGISRRGTLESDDHMLELWETSDKTQKMAAEPAEDHHQRGAAKEIYNKHPSGDSLVEKELRVDKLEISRRMSRPREEGNKSRVLERLDSDAQKLTNLQITIQDLMKKVETAEKSTKGKSTEYDTVKGQLEAAQETVTKLFDANCKLMKNVEEGALSSAGNASAESDEIGSVSRRRVSDQAQRGSEKIGQLQLEVQRLQFLLLKLNDGKESKEKTRMAEQSRRVRLRDYLYGATRTNHQKKKKTPFCACVRPPTKED* 1796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2380 1795 Coils Coil 1286 1320 - -
Mal1g2380 1795 Coils Coil 476 496 - -
Mal1g2380 1795 Coils Coil 1048 1103 - -
Mal1g2380 1795 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Mal1g2380 1795 Coils Coil 581 629 - -
Mal1g2380 1795 Coils Coil 682 765 - -
Mal1g2380 1795 Coils Coil 931 951 - -
Mal1g2380 1795 PANTHER PROTEIN NETWORKED 4A 1 1795 - -
Mal1g2380 1795 Coils Coil 794 828 - -
Mal1g2380 1795 SUPERFAMILY Myosin rod fragments 683 788 - -
Mal1g2380 1795 Coils Coil 1633 1653 - -
Mal1g2380 1795 Coils Coil 854 892 - -
Mal1g2380 1795 Coils Coil 1251 1278 - -
Mal1g2380 1795 SUPERFAMILY Tropomyosin 390 639 - -
Mal1g2380 1795 Coils Coil 1111 1131 - -
Mal1g2380 1795 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1795 - -
Mal1g2380 1795 Coils Coil 1160 1194 - -
Mal1g2380 1795 MobiDBLite consensus disorder prediction 120 164 - -
Mal1g2380 1795 MobiDBLite consensus disorder prediction 126 154 - -
Mal1g2380 1795 Coils Coil 224 244 - -
Mal1g2380 1795 SUPERFAMILY Tropomyosin 218 414 - -
Mal1g2380 1795 MobiDBLite consensus disorder prediction 1694 1724 - -
Mal1g2380 1795 Coils Coil 651 671 - -
Mal1g2380 1795 Gene3D - 676 854 - -
Mal1g2380 1795 Gene3D - 303 474 - -
Mal1g2380 1795 Coils Coil 546 573 - -
Mal1g2380 1795 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Mal1g2380 1795 Coils Coil 252 461 - -
Mal1g2380 1795 Coils Coil 1020 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2380 Mal-Chr1 31900460 31906722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2380 - - lang:109335385 2286.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2380 1 31900460 31906722 Mal1g2380 1 31900460 31906722 ECH
Mal3g3779 3 115307775 115314213 Mal1g2380 1 31900460 31906722 PCT