Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2376 ATGAGAGATGATAACTTGAAGAAAAGCAAGCTTTCATGGCCTAAAACTTTGGTCAAGAAATGGTTTAATATTAAGAGTAAAGCTGAAGATTTTCAAGCAGATGATGATGTTCTTTATGGAGGTGTTGATGAAGAGTGGAGGAACAACTGTTCAAAGAGGGAAGAATGCACTATCAAGAAAAGCAAAACAGAAAGAACAAAGAGAAGGCATTCAGAAAGAACGCGGCGATGTAAGATTGATCATGATGCGGCTCAGGTTACTGATGTGAATAACTATAGAATCTTTGCCGCGACTTGGAATGTAGCTGGACGATCTCCTCCGAGTTATTTAAATCTTGAAGATTGGCTTCATACCTCCCCTCCTGCTGATATTTATGTTCTAGGGTTTCAAGAAATTGTACCGCTCAATGCTGGAAATGTTTTAGGGACAGAAGACAATGCTCCTGCTAGAAAATGGCTAGCTCTTATTAGAAAGACACTAAACAGTCTTCCCGGAACAAGTGGTGAATGCCACACTAATTCACCTCTCCCTGATCCCGTTGTAGAGTTAGATTCTGATTTTGAGGGCTCGATGAGGCAGAAGGCAACCTCTTTCTTCCATCGCAGGTCGTTCCAATCCTTGAGTCATAGTATGAGAGTGGACAATGACATGTTAGTGCCACAAGCATGCCTTGATCGCCGTTTCAGCGTCTGCGATAGAATGATATTTGGTCATAGCACGGGTGACTATGACCCTAATTATAGATGGGGGTCCTCAGATGACGAAAACGGAGACTCTCCTGTTATAGCACAGTACTCACCGATGTCGTACAGAGGGTCTGTTTCTATGGAGGACAGAGATAGACAGACAGAGAAGTCGAGATATTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTAACAGTTTGGGTGAAAAGCAATATTAGAGACGATGTTCGCAACATGAAAGTGTCTTGCGTTGGCAGAGGGTTGATGGGATATCTCGGAAACAAGGGTTCAATATCAATTAGCATGTCTCTGCACAAAACAAGCTTTTGCTTCATATGTAGTCATTTGACTTCTGGACAAAAGGAGGGAGATGAGTTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACGAGGTTTCCCCGGGTTAACGGCATTGGCGATGAGAGTTCACCTCAAACTATTCTGGATCATGATCGAATAATCTGGCTGGGAGATTTAAATTATCGGATAGCCCTTACTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATAATTGGAAGGTTTTGTTAGAGAATGACCAGTTGCATATTGAGCGGGAACAAGGTCGTGTCTTTGAAGGATGGAATGAGGGTCAAATATACTTCCCTCCCACATATAAGTATTCAAACAATTCAGACAGATATGCAGGCGATGAAAGACAGCCAAAACAAAAGAGAAGAACACCAGCATGGTGTGATCGGATCTTATGGTACGGAAGAGGACTCCGCCAATTATCTTATGTTCGCGGGGAGTCAAGATTCTCCGATCATAGACCAGTTTGCAGCGTGTTCATGGCAGAAGTCGAGTCTGTTAGCCGTAACCGAATCAGGAAATGCTCCAGTTGCTCCAGTTCAAGGATCGAAGTAGAAGAGTTGTTGCCTCATTCAAATGGCTACAACTACAATTATACTGATTTGACTTTCTATTGA 1686 0.4247 MRDDNLKKSKLSWPKTLVKKWFNIKSKAEDFQADDDVLYGGVDEEWRNNCSKREECTIKKSKTERTKRRHSERTRRCKIDHDAAQVTDVNNYRIFAATWNVAGRSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNAPARKWLALIRKTLNSLPGTSGECHTNSPLPDPVVELDSDFEGSMRQKATSFFHRRSFQSLSHSMRVDNDMLVPQACLDRRFSVCDRMIFGHSTGDYDPNYRWGSSDDENGDSPVIAQYSPMSYRGSVSMEDRDRQTEKSRYCLVASKQMVGIFLTVWVKSNIRDDVRNMKVSCVGRGLMGYLGNKGSISISMSLHKTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVNGIGDESSPQTILDHDRIIWLGDLNYRIALTYRAAKALVEMHNWKVLLENDQLHIEREQGRVFEGWNEGQIYFPPTYKYSNNSDRYAGDERQPKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVCSVFMAEVESVSRNRIRKCSSCSSSRIEVEELLPHSNGYNYNYTDLTFY* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2376 561 Pfam Endonuclease/Exonuclease/phosphatase family 97 509 IPR005135 GO:0003824
Mal1g2376 561 Gene3D Endonuclease/exonuclease/phosphatase 252 544 IPR036691 -
Mal1g2376 561 Gene3D Endonuclease/exonuclease/phosphatase 71 215 IPR036691 -
Mal1g2376 561 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 553 - -
Mal1g2376 561 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 553 IPR045849 GO:0004445|GO:0046855
Mal1g2376 561 SMART i5p_5 250 524 IPR000300 GO:0016791|GO:0046856
Mal1g2376 561 SUPERFAMILY DNase I-like 82 533 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2376 Mal-Chr1 31819396 31822257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2376 284 523 Acyl Lipid Metabolism Gene Families AT1G65580 30.035 2.50e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2376 - - gmx:100788764 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2376 1 31819396 31822257 Mal1g2376 1 31819396 31822257 ECH
Mal3g3773 3 115200293 115203425 Mal1g2376 1 31819396 31822257 PCT