Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2346 ATGGATCTCACCAAAGTCACACTAGAGATCTTCTCCAAACTCGAACACAAATGGCTCTCTCATTGTAAAGACACAACTACCAAAACTCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGCTGCCTTAATCCATCTCGAGGATCAGATCCGTCTCCAAACCTCCGATCCTCACGCTCATGTCGTTGATTTCTTCGACATTGTCGCCGGTACCGGCATTGGTGCCATCCTCGCCGCAATGATCACCGTCGCTGATGCATTTGGCAGACCAATGTACACTACCAGAGAAGCTGTCCGTATCATCACCGAGAAAAACTCCGAACTCTACAAACGCAAATCCGCCGGAGTATTTCGTCGCCGGTGCCGGAGATTCTCTTCAAAGAACATGGATAACGTGTTGAAAGAAGTGTTCGTTAGAAAAGAAAACGGAACGTTGTTGACTTTAAAGGACACGTGTAAACCTTTGCTTATACCTTGCTTTGACCTCAAGAGTTCTGCTCCATTCGTTTTTTCTCGCGCCGACGCTTCAGAATCTCCTAGCTTCAACTTCGAACTCTGGAAAGTGTGCCGCGCCACGTCAGCAACACCTAACCATTTCAAACCTTTTCAATTCACTTCCGTCGACGGAAAAACCTCTTGCTCCGCCGTAGACGGTGGTTTGGTGATGAACAATCCTACCGCCGCTGCAGTCACGCATGTTCTCCATAACAAACGCGATTTTCCGACGGTTAACGGCGTGGAGGATCTTTTGGTCCTTTCCTTGGGAAACGGATCGTCGAATTCGAAGACACGTGAGAACGAAAACCGCACGTGCTCAACGCCGTTAGTGGTTGACATTGTTCTCGACGGCGTTTCCGAGACGATTGACCAAATGCTTGGAAACGCTTTCTGTTGGAATCGTACGGATTACGTCAGAATTCAGGCGTTTGGTTTGGGAAGTGAAGAGGAAGTGCTGAAGGAAAGAGGATTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTATTGACGGAGACTAACGGAAACAGAATCGGAAGCTTCGTGCAACGTCTTGTTGCTAATGGAAAGCCAAGTCCACCGTTCAGTCCTTGCAAGGATTCAGCTGTCACTTCTCTCGCTAACGGACGCTAG 1140 0.4939 MDLTKVTLEIFSKLEHKWLSHCKDTTTKTRILSIDGGGTTAIVAGAALIHLEDQIRLQTSDPHAHVVDFFDIVAGTGIGAILAAMITVADAFGRPMYTTREAVRIITEKNSELYKRKSAGVFRRRCRRFSSKNMDNVLKEVFVRKENGTLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPNHFKPFQFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPTVNGVEDLLVLSLGNGSSNSKTRENENRTCSTPLVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSEEEVLKERGLESLPFGGKRLLTETNGNRIGSFVQRLVANGKPSPPFSPCKDSAVTSLANGR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2346 379 CDD Pat17_PNPLA8_PNPLA9_like 31 313 - -
Mal1g2346 379 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 379 - -
Mal1g2346 379 Pfam Patatin-like phospholipase 32 234 IPR002641 GO:0006629
Mal1g2346 379 SUPERFAMILY FabD/lysophospholipase-like 28 318 IPR016035 -
Mal1g2346 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 32 235 IPR002641 GO:0006629
Mal1g2346 379 PANTHER PATATIN-LIKE PROTEIN 6 1 379 - -
Mal1g2346 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2346 Mal-Chr1 31294379 31295662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2346 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 71.429 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2346 - - gmx:100795441 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2346 1 31294379 31295662 Mal1g2346 1 31294379 31295662 ECH
Mal3g3750 3 114950648 114952106 Mal1g2346 1 31294379 31295662 PCT