Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2316 ATGGGTAAGATTCTTCGCGAAACAACGAGGCCATCCTCAAATCCATCACCATCATCACCACCACCCTCAACTCCGTCAACCACATCCTCAACATCGATAACCGACACCATCAAAGGCTCACACAGGTTCAAGATAACGGGGTATTCACTCTCGAAAGGGATTGGAATTGGGAAATACATAGCATCGGAGATTTTCACCGTTGGTGGTTACAATTGGGCGATCTATTTCTACCCTGATGGGAAAAGCGTGGAGGATAATGCTACGTATGTGTCGCTTTTCATCGCGCTTGCGAGTGAAGGAACTGATGTTAGGGCTCTTTTTGAATTGACGCTTTTAGATCAGAGTGGGAAAGAGAGGCATAAGGTTCATAGTCATTTTGATAGGACGTTGGAGAGTGGACCGTATACGTTGAAATACCGTGGCAGCATGTGGGGATACAAGAGATTTTTTAAGAGAACCTCATTGGAGACTTCAGATTACCTTAAAGATAATTGCCTTAGTGTTAATTGTAGCGTTGGTGTTGTGAGGTCACATACAGAGGGACCTAAAACATTTTCAATTCCAATATCACCTTCTACTATTGGTCAGCAGTTTGGGAGGCTATTGGAAAGTGGAAAAGGCAGTGATGTGAATTTTGAAGTGAATGGTGAAATTTTTGCGGCTCATAAATTGGTACTAGCAGCTCGATCAGCTGTTTTTAGAGCTCAGCTTTTTGGTCCTATGAAAGATCAGAATACCCAGTGTATAAAAGTTGAAGACATAGAGGCTCCGGTTTTCAAGGCATTGCTTCATGTTATATATTGGGACTCACTACCTGACATGCAAGAGCTTACTGGGATTAACTCAAAATGGGCAGCTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGGCTTAGATAGACTTAGGCTGATATGTGAAGCAAAGCTATGTGAAGATGTTGCAATAAACACTGTGGCTACAACTTTAGCTTTGGCAGAGCAGCACCATTGTTTCCAGCTGAAAGCAGTCTGTCTGAAATTCATTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTCGAGTACTTGAAGGAAAGTTGCCCATCTGTTTTGACTGAGCTTTTGGAGTATGTGGCTAGATTTACTGAGCATACAGACTTCCTGTGCAAGCATAGGAACGAGGCAATACTTGATGGCAGCGACGTAAATGGAAGGCGAGTGAAACAAAGATTATACTGTGAAAAATGA 1248 0.4311 MGKILRETTRPSSNPSPSSPPPSTPSTTSSTSITDTIKGSHRFKITGYSLSKGIGIGKYIASEIFTVGGYNWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFDRTLESGPYTLKYRGSMWGYKRFFKRTSLETSDYLKDNCLSVNCSVGVVRSHTEGPKTFSIPISPSTIGQQFGRLLESGKGSDVNFEVNGEIFAAHKLVLAARSAVFRAQLFGPMKDQNTQCIKVEDIEAPVFKALLHVIYWDSLPDMQELTGINSKWAATLMAQHLLAAADRYGLDRLRLICEAKLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHTDFLCKHRNEAILDGSDVNGRRVKQRLYCEK* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2316 415 CDD BTB_POZ_BPM_plant 194 314 - -
Mal1g2316 415 CDD BACK_AtBPM-like 314 377 IPR034090 -
Mal1g2316 415 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 36 176 IPR008974 GO:0005515
Mal1g2316 415 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 19 391 IPR045005 GO:0016567
Mal1g2316 415 SMART BTB_4 208 317 IPR000210 GO:0005515
Mal1g2316 415 SMART math_3 43 155 IPR002083 GO:0005515
Mal1g2316 415 Pfam BTB/POZ domain 199 315 IPR000210 GO:0005515
Mal1g2316 415 Gene3D - 317 393 - -
Mal1g2316 415 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 19 391 - -
Mal1g2316 415 CDD MATH 39 172 IPR002083 GO:0005515
Mal1g2316 415 SUPERFAMILY TRAF domain-like 36 174 - -
Mal1g2316 415 SUPERFAMILY POZ domain 185 315 IPR011333 -
Mal1g2316 415 Gene3D Potassium Channel Kv1.1; Chain A 184 311 IPR011333 -
Mal1g2316 415 MobiDBLite consensus disorder prediction 1 34 - -
Mal1g2316 415 ProSiteProfiles BTB domain profile. 208 267 IPR000210 GO:0005515
Mal1g2316 415 ProSiteProfiles MATH/TRAF domain profile. 38 172 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2316 Mal-Chr1 30873688 30876827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2316 K10523 - gmx:100799666 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2316 1 30873688 30876827 Mal1g2316 1 30873688 30876827 ECH
Mal3g3714 3 114563437 114566562 Mal1g2316 1 30873688 30876827 PCT