Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2180 ATGGCAGGAAAGCGCGTGTATCAAGTTTGGAAAGGAAGTAATAAATTCATATTGGGAGGGAGGTTGGTATTTGGCCCGGATGCCAGGTCCCTGCTTATCACTTTGTCGTTGATTATTGTTCCAGTTATCATCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATTATTCAGGATATGCTATTTTAGTAGTGGCAATTCTCTTTACTATCCATGTCCTGGTGCTTCTCTGTTTTACTTCCGCACGTGATCCGGGTATCATTCCAAGGAATTCACATCCACCAGAAGAAGATTTTCGTTATGAGTCTTCTGGGGTAGCCGGACAACAAACGCCAACTCTTCAGTTCCCACGAACAAAAGAAGTAATGGTCAATGGCCTTCCTGTAAAGGTGAAATATTGTGAAACTTGTATGCTGTATCGCCCTCCTCGTTGCTCGCATTGCTCCATATGCAACAACTGTGTTGAGCGTTTCGATCACCACTGCCCTTGGGTGGGCCAATGCATCGGGCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCCGCAACTATTCTGTGCATCTATGTGTTTTCCTTCTCAGCATTTTACATCAAGGTTCTGATGGATAATAATGATATTGGCACAGTGTGGAAGGCGATAAAAGAATCCCCCGCATCTGTGATTTTAATGGCTTATTGTTTCATCTCTCTGTGGTTTGTTGGTGGACTAACTGGTTTTCATTTGTACCTTATAGGCACAAACCAGACGACCTATGAAAACTTCCGATACAGAGCTGATGGCAGGATCAATGTTTTTAATCGAGGTTGTTTAAATAATTTTCTCGAAGTGTTTTGCACAGAAATAAAGCCCTCAAGGAACGATTTCAGGGCTTTTGTCCAAGAGGAGGTACAAAGGCCGTTGTCTACGGTCATTTCCCGGGGACGTGAACAGGATGATTTAGGTGGAGATCGCCGTCCTAAGGTTGAAGATGATCTAGATATTGGTGAAGATCTATTGAAGATATCACAGCGTAGGAATATTGAAGAACTGGACGAGGACATTCTGAGTAGAGGGAGCAATGGTGCGCCCCATAATACAGCTGAACCCGATTCCATTTTGTCGTCAGATCATCGAGCTACCACAATACGATCTGATGCTAGGCACTCAAGTTGGGAAAGAAGTGGAAACTGGGAAATTGCACAAGATGTCTTTGCCAATTCAAATGTCACCGAAAGTACTAGAAACTATGTCATGTCAAAGGAAATGCGCCAATGA 1272 0.43 MAGKRVYQVWKGSNKFILGGRLVFGPDARSLLITLSLIIVPVIIFCVFVARHLRHEFSSYYSGYAILVVAILFTIHVLVLLCFTSARDPGIIPRNSHPPEEDFRYESSGVAGQQTPTLQFPRTKEVMVNGLPVKVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSFSAFYIKVLMDNNDIGTVWKAIKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADGRINVFNRGCLNNFLEVFCTEIKPSRNDFRAFVQEEVQRPLSTVISRGREQDDLGGDRRPKVEDDLDIGEDLLKISQRRNIEELDEDILSRGSNGAPHNTAEPDSILSSDHRATTIRSDARHSSWERSGNWEIAQDVFANSNVTESTRNYVMSKEMRQ* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2180 423 ProSiteProfiles DHHC domain profile. 136 186 - -
Mal1g2180 423 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 422 - -
Mal1g2180 423 PANTHER S-ACYLTRANSFERASE 6 422 - -
Mal1g2180 423 Pfam DHHC palmitoyltransferase 136 261 IPR001594 GO:0016409
Mal1g2180 423 MobiDBLite consensus disorder prediction 358 375 - -
Mal1g2180 423 MobiDBLite consensus disorder prediction 309 328 - -
Mal1g2180 423 MobiDBLite consensus disorder prediction 354 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2180 Mal-Chr1 28758664 28762369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2180 65 286 Lipid Metabolism Gene Families AT4G22750 28.033 5.50e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2180 K16675 - gmx:100820208 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2180 1 28758664 28762369 Mal1g2180 1 28758664 28762369 ECH
Mal8g3461 8 97403493 97413003 Mal1g2180 1 28758664 28762369 PCT