Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2172 ATGGACACTAATGGGAGACTAGTTGCAGGTTCACATAACAGGAATGAGTTTGTTCTTATCAATGCTGATGACACTGCAAGAGTGAATGCTGTTACAGAATTGAGTGGACAAATTTGCCTGATCTGTGGTGATGAGATAGAGGTCACACTAGATGGTGAACCTTTTGTTGCTTGCAATGAATGTGCATTCCCTGTGTGTAGGCCTTGCTATGAGTATGAAAGAAGAGAAGGAAACCAAGCTTGTCCTCACTGCAAAACTAAATACAAACGCATAAAGGGTAGTCCAAGAGTTGAGGGTGACGAAGAAGAGGATGGTATTGATGATTTGGAAAATGAGTTTGACATTGGAATCAATATCAAACATGACCCTCATCACATTACTGAGGCCATGTTCTTCTCTCGCCTCAACAATATTGGTCGGAGTTCACAAATGAATATTTCAGGAATCACCACACCGTCGGAGTTTGATGCAGCTTCAGTGGCTGCTGATATCCCTCTATTGACAGATGATCATGAGGATCTTGGTATTTCTTCTGATAATCATGCTCTCATTATCCCTCCATTCAAGCCCTATGGGAAACGGGTTCATCCAATGCCTTTTCCTGATTCATTTGTGGCAGTTCAACCCAGACCTATGGATCCTAATAAAGATTTAGCTGTTTATGGATATGGAAGTGTTGCATGGAAGGAAAGAATGGAGGAATGGAAGAAAAAGCAGAATGAAATATTAGAGGTGGTTAAGCACAAAGGGGGTAACAATGGTGATGAAAATGATGATGAGTTTAATGATCCTGATTTGCCAAAAATGGATGAAGGAAGGCAGCCGCTGTGGAGGAAGTTACCGATTAGCCCAAGCAAGATAAACCCATATCGAATCATAATAGTACTCAGGATCGCTGTGCTTGGTCTCTTTTTTCATTACAGAATTCTTCATCCGGTCAACGATGCATATGCATTGTGGCTAACATCAGTAATATGTGAAATTTGGTTTGCTGTTTCATGGATTTTGGATCAATTTCCAAAATGGTCTCCAATTGAACGAGAAACATACCTTGATCGTTTGTCACTGAGGTATGAGAAGGAAGGAAAGCCTTGTGAATTAGCTGATATTGACGTATTTGTTAGTACTGTGGATCCTATGAAAGAGCCTCCTCTTATAACTGCAAATACAGTTCTATCCATCCTAGCAGTAGATTATCCGATGGAAAAAGTGGCGTGCTATGTCTCAGACGACGGTGCAGCTATGCTAACATTTGAAGCCCTTTCAGAAACTTCAGAGTTTGCAAGAAAATGGGTTCCATTCTGCAAGAAGTTCAGCATCGAACCGCGGGCTCCTGAGTGGTATTTTGCTCAGAAGGTTGACTATCTAAGAGACAAAGTGGACGCTGCATTCATCAAGGAGCGCCGTGCTATTAAGAGGGACTATGAAGAGTTTAAAGTGAGGATTAATGCATTGGTTGCAATGGCGCAAAAGGTACCTGAGGATGGCTGGACAATGCAAGATGGGACTCCGTGGCCTGGAAACAATGTGAGAGATCATCCTGGAATGATTCAGGTTTTACTTGGACAAAATGGTGTTCGTGATATTGAAGGGAACGAGTTACCTCGTCTTGTTTATGTGTCTCGTGAAAAAAGACCTGGATTCGAACACCACAAAAAAGCTGGTGCTATGAATGCCTTGGTGCGAGTCTCGGCAGTCATATCAAATGCTCCTTACATGCTAAATGTTGATTGTGATCACTACATAAACAACAGTAAGGCACTTCGCGAAGCCATGTGTTTCATGATGGATCCTACATCAGGCAAAAAAATATGCTATGTACAATTTCCTCAAAGATTTGATGGAATTGATCGTCACGATAGATACTCAAATCGTAATGTTGTATTCTTTGATATCAACATGAAAGGTTTAGATGGCATCCAAGGACCGATATATGTGGGAACTGGGTGTGTCTTCAGGAGGCAAGCACTCTATGGATATGATGCCCCGGCCAAGAAGAAACCACCAGGGAAGACATGTAACTGTTGGCCCAAATGGTGCTTCATGTGTTGTGGATCAAGAAAGAAGAATAGAAAAGTGAATTCTGGTCCGAGAAAGAAGTTAATGAATAATGACGTCGCAAAACAAATACATGCACTCGAAAATATTGAAGAGGGAATTGAGGGAATTGACAATGAGAAGTCATCACTAATATCACAACTGAAATTTGAGAAAAAATTTGGGCAGTCATCTGTTTTCATAGCTTCAACGCTTGTGGAAGATGGAGGCATTCTAAAAGAAGCAACTTCTGCATCACTCTTGAAAGAAGCCATCCATGTTATCAGTTGCGGTTACGAGGACAAGACTGAGTGGGGGAAAGAGGTTGGATGGATATATGGTTCAGTTACAGAAGATATATTAACAGGTTTCAAGATGCACAGTCATGGTTGGCGATCGGTATATTGCATGCCTAAAAGGCCTGCTTTTAAAGGTTCAGCTCCTATAAATCTCTCGGATCGTCTGCATCAAGTTCTTCGGTGGGCACTTGGATCTGTTGAGATCATGTTGAGTAGGCATTGTCCTATATGGTATGGATACGGTTGTGGATTGAAATGGCTGGAACGTTTTTCTTACATAAATTCAGTGGTTTATCCTTTGACATCAGTTCCCTTAATTGTTTACTGCACCTTGCCAGCTGTGTGTCTTCTCACTGGGAAGTTCATAGTTCCTGAGATTAGCAACTATGCTAGTATCATTTTCATTGCACTTTTTATTTCAATAGCAGCAACTGGCATCCTAGAAATGCAATGGGGAGGTGTTGGCATACAAGACTGGTGGAGGAATGAACAATTCTGGGTCATCGGCGGCGCCTCCTCACACCTCTTTGCTCTCTTTCAAGGCTTGCTTAAGGTTCTAGCAGGAGTTAACACAAACTTCACAGTCACGTCAAAAGCCGCCGATGACGGAGACTTTGCTGATCTTTACATCTTCAAGTGGACATCATTGTTAATCCCTCCTTTAACCTTGCTTATCCTAAACATAATTGGAGTTATAGTTGGTGTTTCAGATGCAATAAACAATGGCTATGATTCATGGGGTCCCTTGTTTGGCAAGTTATTTTTTGCTCTATGGGTTATTTTACATCTTTATCCATTTCTTAAGGGTGTTATGGGAAAACAAGAAGGTGTTCCTACCATCATTTTGGTTTGGGCTATTCTTTTGGCTTCAATATTTTCACTTCTATGGGTTAGGATCAACCCGTTTTTGTCGAAAAATGGCATTGTGTTGGAACTTTGTGGGTTGAATTGTGATTAA 3294 0.4132 MDTNGRLVAGSHNRNEFVLINADDTARVNAVTELSGQICLICGDEIEVTLDGEPFVACNECAFPVCRPCYEYERREGNQACPHCKTKYKRIKGSPRVEGDEEEDGIDDLENEFDIGINIKHDPHHITEAMFFSRLNNIGRSSQMNISGITTPSEFDAASVAADIPLLTDDHEDLGISSDNHALIIPPFKPYGKRVHPMPFPDSFVAVQPRPMDPNKDLAVYGYGSVAWKERMEEWKKKQNEILEVVKHKGGNNGDENDDEFNDPDLPKMDEGRQPLWRKLPISPSKINPYRIIIVLRIAVLGLFFHYRILHPVNDAYALWLTSVICEIWFAVSWILDQFPKWSPIERETYLDRLSLRYEKEGKPCELADIDVFVSTVDPMKEPPLITANTVLSILAVDYPMEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFAQKVDYLRDKVDAAFIKERRAIKRDYEEFKVRINALVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVLLGQNGVRDIEGNELPRLVYVSREKRPGFEHHKKAGAMNALVRVSAVISNAPYMLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPAKKKPPGKTCNCWPKWCFMCCGSRKKNRKVNSGPRKKLMNNDVAKQIHALENIEEGIEGIDNEKSSLISQLKFEKKFGQSSVFIASTLVEDGGILKEATSASLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHSHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIMLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSVPLIVYCTLPAVCLLTGKFIVPEISNYASIIFIALFISIAATGILEMQWGGVGIQDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGDFADLYIFKWTSLLIPPLTLLILNIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVILHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFLSKNGIVLELCGLNCD* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2172 1097 SUPERFAMILY RING/U-box 26 107 - -
Mal1g2172 1097 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1096 - -
Mal1g2172 1097 SUPERFAMILY Nucleotide-diphospho-sugar transferases 384 914 IPR029044 -
Mal1g2172 1097 Pfam Cellulose synthase 370 1085 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mal1g2172 1097 MobiDBLite consensus disorder prediction 248 268 - -
Mal1g2172 1097 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 514 665 IPR029044 -
Mal1g2172 1097 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Mal1g2172 1097 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 9 [UDP-FORMING]-RELATED 1 1096 - -
Mal1g2172 1097 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Mal1g2172 1097 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Mal1g2172 1097 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2172 Mal-Chr1 28657269 28662658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2172 1 1096 Glycosyltransferase AT2G21770 77.727 0.0 1763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2172 K10999 - pop:7492474 1936.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2172 1 28657269 28662658 Mal1g2172 1 28657269 28662658 ECH