Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2153 ATGTTGCCTCATCGTCAACCCAACATTCTTCTTATCCTCCGAAATTCTTCAACTAAACACCAACCAAAACCCTTCATTCAGATTCTCCAAAGACACTATTGTTTATGGTCAAGTAAAAAAGACCCAGACTTAGAATCAGCACTCTCACGTAACAAACGTTGGATAATCAACAATCAAATCAAAAACATTATCCTCCGTTACCCTAACAATCAAATCCCAATCCAAACTCTTCAGAAGAAATTCAAAACCCTAGATCTTCAAGGTAAAGCCCTTAATTGGATTTCTAAATACCCTTCTTGCTTTCAATTTCATCAAAATCATGTTTTTCTAACCAAACGCATGATGGAACTTGTTCTTGAAGAACAATCCGTGAAAGATTCTCTTGAATCTGTTTTCGTTCGACGTCTCGCGAAATTGCTCATGCTTTCTTTTAATAATTCTTTAAATGTTATGAAGATTAATGAAATTAAGAATAGTTTAGGGTTTCCTGATGATTATTTGATTGGGATTGTGGCCAAGTATTCGGATTTGTTTCGGATTAGGAATGAGAGTGGGAGGAGGAGTTCTATGGTGGTTGAGTTGATGAAATGGGATCCTAATTTTGCTGTTTCTGAAGTTGAGGCGTTAGCGATGAAGAAGGGGGTTGAGGCAAATTTTTCGTGTTGTTTGCCTTCTAGTTGGGTGAAATCGATTGAGAAATTTCGCGAATTTGAATCGGTTCCTTATGTTTCGCCTTATTCGGATCCGAGGGGGTTGGTTGAAGGGTCTAAGGAAATGGAGAAGAGAAATGTGGGTTTGGTTCATGAGTTGTTGTCATTGACTCTTTGGAAGAAGATTTCAATTATGAAATTGGGTCATTTTAAAAGGGAGTTCTTTTTGCCTGATAAGGTGAATGTGTTGCTGCTTAAGCATCCTGGGATTTTCTATGTTTCTAATAAGTATAGGATTTATACTGTTTTATTAAGAGAAGGGTATGTTGGGTCTCAATTAGTTGATAAGGATCCTCTCGTGGTTGTTAAGGAGAAATTTGGGGAGATTATGCAGGAAGGGCTTCATGAGTATAACCAGAGGCGGCGTCTTGTTAATATCGAAAAGAAGAGAAACAAAGGTGTTCCTTTGGATAGGGTGGATGAGGATCAAATGAAGGGTAGAAAAAGGAGAAGAAACAGGGAAGATTCTGATGAAGATGAGGTTGATGGAGAAAATGGTAGTAAGTTGGGAGGGTTGCTTGACCCTGAAGAAAGAAAAAGGTTTTATAAAGTTCTTTTTGATGATGATGGTTCATGA 1287 0.3784 MLPHRQPNILLILRNSSTKHQPKPFIQILQRHYCLWSSKKDPDLESALSRNKRWIINNQIKNIILRYPNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCFQFHQNHVFLTKRMMELVLEEQSVKDSLESVFVRRLAKLLMLSFNNSLNVMKINEIKNSLGFPDDYLIGIVAKYSDLFRIRNESGRRSSMVVELMKWDPNFAVSEVEALAMKKGVEANFSCCLPSSWVKSIEKFREFESVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFKREFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQEGLHEYNQRRRLVNIEKKRNKGVPLDRVDEDQMKGRKRRRNREDSDEDEVDGENGSKLGGLLDPEERKRFYKVLFDDDGS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2153 428 ProSiteProfiles MADF domain profile. 24 115 IPR006578 -
Mal1g2153 428 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 22 399 IPR045040 GO:0003723
Mal1g2153 428 Pfam Plant organelle RNA recognition domain 39 350 IPR021099 GO:0003723
Mal1g2153 428 MobiDBLite consensus disorder prediction 372 410 - -
Mal1g2153 428 MobiDBLite consensus disorder prediction 372 394 - -
Mal1g2153 428 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 22 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2153 Mal-Chr1 28352103 28353389 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2153 - - mtr:MTR_3g029990 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2153 1 28352103 28353389 Mal1g2153 1 28352103 28353389 ECH