Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2129 ATGGCATCCTTCAAAAAAGTTTCAATATTGTTCCCTCTTTTGCTCATTTCCCTATTCACATCCTCTCATGCTGCAGGAATTGCAGTCTATTGGGGCCAAAATGGAAATGAAGGTTCCTTAGCAGATGCTTGCAACACAAACAACTACCAATTTGTAAACATAGCTTTTCTATCCACTTTTGGCAATGGTCAAAATCCAACTCTAAACCTTGCTGGCCATTGTGATCCAGCTTCAAACGGCTGCACAAAGTTTAGTAGTGAAATTCAAACTTGTCAAGGCAAAGGCATCAAAGTGTTTCTCTCTCTCGGAGGCGGCGCCGGAAGCTACTCTCTTAGTTCAGCTGATGATGCCACACAGCTTGCAAATTACCTATGGAACAATTTCTTGGGTGGCACGTCATCTTCAAGACCATTAGGAGATGCTGTTTTGGATGGAATAGATTTTGATATTGAAGCTGGTGGTCAACATTATGATGACCTTGCAAGAGCACTTAATGGTTTTAGTTCACAAAAGAGAGTTTACTTGTCTGCAGCACCACAATGTCCTTACCCTGATGCTCATTTGGATTCAGCTATTAATACTGGTTTATTTGATTATGTTTGGGTTCAGTTTTATAATAATCCTCAATGTCAATACTCAAATGGAAACACTAACAATCTTGTTAATGCTTGGAATCAATGGATTTCAAGTCAAGCTAAACAAGTGTTTTTAGGTGTTCCTGCTAATGATGCTGCTGCTCCAAGTGGTGGTTTTATTCCTTCTGATGTTTTGATCTCTCAAGTTCTTCCTGCTATTAAGGGTTCTGCTAAATATGGTGGTGTTATGATTTGGGATAGATTCAATGATGGACAAAGTAGTTACAGTAATGCTATTAAGGGCAGTGTTTAA 888 0.3919 MASFKKVSILFPLLLISLFTSSHAAGIAVYWGQNGNEGSLADACNTNNYQFVNIAFLSTFGNGQNPTLNLAGHCDPASNGCTKFSSEIQTCQGKGIKVFLSLGGGAGSYSLSSADDATQLANYLWNNFLGGTSSSRPLGDAVLDGIDFDIEAGGQHYDDLARALNGFSSQKRVYLSAAPQCPYPDAHLDSAINTGLFDYVWVQFYNNPQCQYSNGNTNNLVNAWNQWISSQAKQVFLGVPANDAAAPSGGFIPSDVLISQVLPAIKGSAKYGGVMIWDRFNDGQSSYSNAIKGSV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2129 295 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 25 295 IPR001223 GO:0005975
Mal1g2129 295 Pfam Glycosyl hydrolases family 18 27 279 IPR001223 GO:0005975
Mal1g2129 295 PANTHER ENDOCHITINASE 12 295 - -
Mal1g2129 295 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 143 151 IPR001579 GO:0004553|GO:0005975
Mal1g2129 295 SUPERFAMILY (Trans)glycosidases 23 291 IPR017853 -
Mal1g2129 295 PANTHER ACIDIC ENDOCHITINASE 12 295 - -
Mal1g2129 295 CDD GH18_hevamine_XipI_class_III 25 293 IPR045321 -
Mal1g2129 295 Gene3D Glycosidases 25 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2129 Mal-Chr1 27812550 27813437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2129 1 295 Glycoside Hydrolase AT5G24090 58.667 2.59e-124 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2129 K01183 - gmx:100783329 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2129 1 27812550 27813437 Mal1g2129 1 27812550 27813437 ECH