Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2128 ATGGCAAAAAACTCTCACACTTTGTTGCCTCTTATCTTTCTCTTATTCCAAACTCTCATTGCAACTTCTCATGCTGGTGGCATAGCCATCTATTGGGGCCAAAACGGCAATGAGGGAACCTTATCCGAAGCATGCGCAACCGGAAAATACTCCCACGTTAACATAGCCTTTCTCAACAAATTCGGTAACGGTCAAACCCCTGAAATGAATCTCGCAGGTCACTGCAACCCATCAATTCCAAATTCATGCACAAAATTCAGCTCAGAAATCAAAGATTGTCAAAGTAAAGGAATCAAAGTTTTACTTTCAATTGGTGGTGGAATTGGAAGCTACTCTTTATCTTCAATTGAAGATGCAAGAAACGTTTCAAAATTTTTATGGAACACTTTCTTGGGTGGCAAGTCATCTTCAAGACCATTAGGTGATGCTATTTTAGATGGAATAGATTTTGATATTGAACTTGGTTCCACAGAAAATTGGGAACACCTTGCACATTTTCTTAAAGGGTATAGTAGATTTGGAAAAAAAGTGTATCTTGGTGCTGCTCCTCAATGTCCAATTCCTGATAAATTTTTAGGCACTGCACTTGAAAAAGGTCTTTTTGACTTTGTTTGGGTTCAATTTTACAATAATCCTCCTTGTCAATATAATGGAAACATAACTAATCTTGTGAATTCATGGAATAAATGGAATAGTATTTTTCCAGCTGGGAAGATATTTTTAGGGTTGCCGGCGTCTACGGCAGCGGCCGGAAGTGGTTTTATTCCGGCAGATGTGTTGACATCTGAAATTTTACCTGTGATTAAGAAGTCAAGAAAGTATGGAGGAGTGATGCTTTGGTCAAGGTTTCATGATGTACAGACTGGGTATAGCACTTCTATTATTGGAAGCGTGTGA 897 0.3868 MAKNSHTLLPLIFLLFQTLIATSHAGGIAIYWGQNGNEGTLSEACATGKYSHVNIAFLNKFGNGQTPEMNLAGHCNPSIPNSCTKFSSEIKDCQSKGIKVLLSIGGGIGSYSLSSIEDARNVSKFLWNTFLGGKSSSRPLGDAILDGIDFDIELGSTENWEHLAHFLKGYSRFGKKVYLGAAPQCPIPDKFLGTALEKGLFDFVWVQFYNNPPCQYNGNITNLVNSWNKWNSIFPAGKIFLGLPASTAAAGSGFIPADVLTSEILPVIKKSRKYGGVMLWSRFHDVQTGYSTSIIGSV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2128 298 PANTHER ACIDIC ENDOCHITINASE 2 298 - -
Mal1g2128 298 Pfam Glycosyl hydrolases family 18 28 284 IPR001223 GO:0005975
Mal1g2128 298 CDD GH18_hevamine_XipI_class_III 26 296 IPR045321 -
Mal1g2128 298 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Mal1g2128 298 Gene3D Glycosidases 26 297 - -
Mal1g2128 298 SUPERFAMILY (Trans)glycosidases 23 294 IPR017853 -
Mal1g2128 298 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 298 IPR001223 GO:0005975
Mal1g2128 298 PANTHER ENDOCHITINASE 2 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2128 Mal-Chr1 27796632 27797528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2128 1 298 Glycoside Hydrolase AT5G24090 63.123 3.28e-141 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2128 K01183 - gmx:100818728 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2128 1 27796632 27797528 Mal1g2128 1 27796632 27797528 ECH