Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2126 ATGGCAAAACAAATTCTTGCCTTGTCACTTCTTTTCCTCACTCTTGTTGGAACCTCCCATGCTGGTGGCATAGCCATCTACTGGGGCCAAAAAAGTGAAGAGGGCTCACTGTATGAAACATGTGCTACTGGGAGATACACCCACATAAACATTGCCTTCCTCTCCAGGTTCGGCAACGGTCGAACCCCTACATTGAACTTAGCAGGTCACTGCAACCCTTCAACTAATTCATGCACCAAATTAAGTGACAGCATCAAGTATTGCCAGCGCAAAGGTATCACAATGTTTCTTTCTATCGGCGGTGGAGTCGGAAGATACTCTTTGTCTTCAATTGAGGATGCTAGAAGCTTCTCAAGATATTTATGGAACACTTTCTTGGGTGGCACGTCATCTTCAAGACCATTTGGTGATGCTGTGTTAGATGGCATTGATTTTGATATTGAATTTGGTTCCACACGAAACTGGCAACACCTTGCACAATTTCTCAAGGATTATAATGGAGTTTATCTAAGTGCTGCTCCTCAATGTCCATTTCCTGATAGATTCTTAGGAAGAGCCCTTGATACAGGACTTTTTGACTTTGTTTGGGTTCAGTTCTATAATAATCCCTCATGTGATTACACTAAACATAGAAAGAATAACCTTGTGAGTTCATGGAAACAATGGACAACTACTATTCCAGCTTGGAAGATATTTTTGGGGTTGCCGGCAGCTAAGGACGCTGCTGGAAGCGGCTTTATCCCAGCCGATGTGTTGACGTCTGAAATCCTACCTTTGATTCAGTATACATCAAAGTATGGAGGTGTTATGCTTTGGTCAAGATACTTTGATGAGTGGACTGGTTATAGCAGTTTGATTGTAGATAGTGTGTGA 873 0.4238 MAKQILALSLLFLTLVGTSHAGGIAIYWGQKSEEGSLYETCATGRYTHINIAFLSRFGNGRTPTLNLAGHCNPSTNSCTKLSDSIKYCQRKGITMFLSIGGGVGRYSLSSIEDARSFSRYLWNTFLGGTSSSRPFGDAVLDGIDFDIEFGSTRNWQHLAQFLKDYNGVYLSAAPQCPFPDRFLGRALDTGLFDFVWVQFYNNPSCDYTKHRKNNLVSSWKQWTTTIPAWKIFLGLPAAKDAAGSGFIPADVLTSEILPLIQYTSKYGGVMLWSRYFDEWTGYSSLIVDSV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2126 290 PANTHER ACIDIC ENDOCHITINASE 5 290 - -
Mal1g2126 290 Pfam Glycosyl hydrolases family 18 24 243 IPR001223 GO:0005975
Mal1g2126 290 PANTHER ENDOCHITINASE 5 290 - -
Mal1g2126 290 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 22 290 IPR001223 GO:0005975
Mal1g2126 290 Gene3D Glycosidases 22 287 - -
Mal1g2126 290 SUPERFAMILY (Trans)glycosidases 19 286 IPR017853 -
Mal1g2126 290 CDD GH18_hevamine_XipI_class_III 22 288 IPR045321 -
Mal1g2126 290 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 140 148 IPR001579 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2126 Mal-Chr1 27781393 27782265 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2126 22 290 Glycoside Hydrolase AT5G24090 60.440 7.46e-126 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2126 K01183 - gmx:100809864 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2126 1 27781393 27782265 Mal1g2126 1 27781393 27782265 ECH