Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2123 ATGGAAGGAAGTATTAGCTCATCAAGCAATTTGCGTGAAGAAAGTACTCATGTGTCAAAAGATTCTCTTGAGATTGACCAAGATTTAGTTGTGGGTGAACCTGGAAATGTTCAGTCCGAGTTTATCAGCTCCAAGTCTGCTGATGATTCAACTTTCATATTGAATGACTATCTGGAACATGGAAAAGCTGGCAATACCACTCTAAAAGGTCATGACAGTCCCCATATAGGCAGACAGATATACTTCAAGGCCGCTTCCTCTGAATTGTCTAGTGAAGAAGACTTTGCTGAGGTCAAAGTAGAGCACCAGGAGACTTTTTTGGGGCACACCAGTCCAATCAGCCGGTGCCGCTTCTCTGCCTCTGGAAACAATATTGCCAGTGCTTCTCTAGATGGAACTGCCAGGATATGGACTTTTGATGCATCAACTCCGGCTTCTAGAAATGCAACCATATATTGTGGCACTGAAATTTTGTCTCTTGACTGGGAATGCAAATCAGACCGATTGCTTCTAATAGGTACATCTGATGCGTGCATTAAGGCATGGAACGTGGACGCAAAAAGAGTTGTTTGTGACCTTAACACAACTGAAGCATTTCCTAGTGTATTGGACATAAAGTGCAGTCCTGTTGAACCTGTTTTTGTGTCTGCGGCAGCATCTGGAGGGTCTGGTTCCAACTACTTTGACAACCTGGGTTTCGCTTCACTGACTGTATGGAACATGAAGACATGGAAAGCCATGACAGTCCTTCCTCTTGGAGAAGATCCACCGGCAATTACTTCTCTATGCTTCAACCACAATGGGAAAATTTTAGCAGCTTCTGCTGTGGATGGAATGATTCACATGTTTGATATGTCTGCTGGTCTACAAATCACTGGCTGGCCTGCACATGATTCTTCCATCAGTTCTATTCTTTTTGGACCAGATGAGACTAGCATTTTTAGCCTCGGCTCTGATGGGAAGATTTTTGAGTGGAGCTTGCAAAATCAAGGTCAAATCTTGTGGTCAAGAGACTGTAGTAGGTACTGTTACCCCAGTTCAAATTATTACAGACATGATATGGCATTAGATGCAAATGGGAGGAGACTCTTAGTAACATCCAGTTCAGTTAGAGCACCCATATATCAGGTTCAGGGTCATTTGAATGGTTGGAGAACACTTTCTCACGGTGCTCCTATCACTGCTGTAGATTGGCATCCGACCTTGCCCATTTTCTTGACTGGATCAGCTGATAACTCTGTCCGAGTAACATCTTTACTATCATAG 1266 0.4344 MEGSISSSSNLREESTHVSKDSLEIDQDLVVGEPGNVQSEFISSKSADDSTFILNDYLEHGKAGNTTLKGHDSPHIGRQIYFKAASSELSSEEDFAEVKVEHQETFLGHTSPISRCRFSASGNNIASASLDGTARIWTFDASTPASRNATIYCGTEILSLDWECKSDRLLLIGTSDACIKAWNVDAKRVVCDLNTTEAFPSVLDIKCSPVEPVFVSAAASGGSGSNYFDNLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFDMSAGLQITGWPAHDSSISSILFGPDETSIFSLGSDGKIFEWSLQNQGQILWSRDCSRYCYPSSNYYRHDMALDANGRRLLVTSSSVRAPIYQVQGHLNGWRTLSHGAPITAVDWHPTLPIFLTGSADNSVRVTSLLS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2123 421 Gene3D - 350 421 IPR015943 GO:0005515
Mal1g2123 421 MobiDBLite consensus disorder prediction 1 25 - -
Mal1g2123 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 106 137 - -
Mal1g2123 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 294 329 IPR001680 GO:0005515
Mal1g2123 421 Gene3D - 224 349 IPR015943 GO:0005515
Mal1g2123 421 SMART WD40_4 144 183 IPR001680 GO:0005515
Mal1g2123 421 SMART WD40_4 243 284 IPR001680 GO:0005515
Mal1g2123 421 SMART WD40_4 287 326 IPR001680 GO:0005515
Mal1g2123 421 SMART WD40_4 99 138 IPR001680 GO:0005515
Mal1g2123 421 SMART WD40_4 380 418 IPR001680 GO:0005515
Mal1g2123 421 Pfam Anaphase-promoting complex subunit 4 WD40 domain 253 306 IPR024977 -
Mal1g2123 421 Gene3D - 38 223 IPR015943 GO:0005515
Mal1g2123 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 106 147 IPR001680 GO:0005515
Mal1g2123 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 386 421 IPR001680 GO:0005515
Mal1g2123 421 SUPERFAMILY WD40 repeat-like 97 416 IPR036322 GO:0005515
Mal1g2123 421 PANTHER OS05G0299300 PROTEIN 81 419 - -
Mal1g2123 421 Pfam WD domain, G-beta repeat 103 137 IPR001680 GO:0005515
Mal1g2123 421 Pfam WD domain, G-beta repeat 386 416 IPR001680 GO:0005515
Mal1g2123 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 386 421 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2123 K24760 - mtr:MTR_1g099380 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2123 1 27753314 27757490 Mal1g2123 1 27753314 27757490 ECH