Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2088 ATGATGAAGAGTCACACAATAATATTCCTAAGGATCATTTTTCTTTTGATATTTCTTGGATGGTTAACGGTTTGGATCTTGTTGCCCACAAAGATCTACAAAAACACATGGACTCCCAAGCTAGAAATCAAGCTCAATTCTACATACTTCAGAGAGCAAGGGGTAAATATCCTGCTTTTCACATTCCCTATGATGTTCATTGGAGCTCTGGGTTGTATTTATCTACATCTTCAACAGGAAAAAATAACACAAAAGTTACCCTCCACAAGTAGTGGCGCTCTACAAAAATGTTTATGCTACCTGAGACGACCATTCCTAGTGATGTCTTCAATTGGAATTGTTTCAGCTATGGAGCTTATTTTTGCAATCATGTTTGTTGCACTTTTGATATGGTCCCTTTACAATTACTTAAGTACCAGTTTTGGTCACCTCCATATGCACAAAGAAGGCGAGAAAGTATGGGAAGCGAAGTTCAGGAGTGTATTTTTGAGACTTGGTTACATAGGAAACATATGTTGGGCATTTTTGTTCTTTCCAGTGACAAGAGGGTCTTCCATTCTGCGTCTTGTGGGTCTCACATCTGAGTCAAGCATCAAGTATCATATCTGGCTTGGACAATTATCTATGCTTCTTTTTGCTGCGCATACCATAGGTTTTTTCATATATTGGGGCATCACCAATCAAATGGTTGAGGCGTTAGAGTGGAGCAAGACATATGTATCCAATGTAGCTGGAGAGATTGCTAGTTTAATAGCATTAGCCATGTGGATAACAAGCATTCCACGAATAAGGCGTAAGATGTATGAAGTATTCTTCTACACTCACCATCTTTACATTCTCTATATCTTATTCTATGCAATCCATGTTGGAGTTGAATACATGTGCATGATTGCTCCTGGGATTTTCCTATTCCTCATTGATAGACACCTTAGATTCTTACAATCTCGCCAACATGCTCGGTTACTATCAGCTCGCATTTTACCTTGTGATGCCCTTGAGCTCAACTTCTCCAAGGATCCTAGTTTACACTATAACCCCACAAGTTTGGTGTTCATAAATGTTCCAAAGGTTTCCAAGCTACAATGGCACCCTTTTACGGTGTCTTCTAGTTGTAATTTGGAGACTAACTATCTTAGTGTTACAATAAAAAATGTGGGCAGCTGGTCAAACAAGCTTTATCAAGAACTTTCTTCTTCATCTTTGGATCATCTTAATGTTTCAGTTGAAGGACCCTACGGACCTCATTCTGCACAATTTTTAAGGCATGAACAGATTGTGATGGTAAGTGGTGGAAGTGGAATCACTCCCTTCATATCTATAATCCGAGATCTCATATTTCAAAGCCAACAACAAGAATTCCAACCTCCAAAACTCCTACTTGTTTGTATCTTCAAAAACTATGTTGATCTAACCATGTTAGATCTTATGCTTCCTGTTTCTGGTGCAACAACTCAAATCTCACAGCTTCAGTTACAAATTGAAGCTTACATCACAAGAGAAAAAGAAGAACCTTCAAGAGATACTCAAAAACAAATCCAAACAATATGGTTTAAAACAAACCTCTCAGATTCTCCTATCTCAGCTGTATTAGGCCCAAATAATTGGTTATGGCTTGGTGCTATAATCACATCATCGTTCATCATGTTTCTCCTCCTTCTAGGAATCGTTACTCGTTACTATATTTATCCAATTGAAAATAACACAGGTGAAGTGTATAACTGGACCTACAAGGTTATGTGGTACATGTTTCTACTTTGTGCATGTATATGCATGTGTTCTAGTGTTGTTTTTCTTTGGTGTAAGAGACAGAACACTTTGGAAAATAAGCAAATAATGAATGTAGAAGTTCCAACACCAACAAGATCACCAGGGTCATGGATTTATGGTTCAGAAAGAGAGCTTGAAAGCCTTCCTCATCAATCTTTAGTGCAAGCTACCAATGTACATTTTGGTGCAAGACCTGATCTCAAGAAAATTCTGTTTGAGTGTGAAGGCAAAGATGTTGGAGTTATGGTTTGTGGTCCAAGAAAATTGAGACATGAAGTTGCTAGAATTTGTGCTTCTGGTTTGGCTGATAATCTTCACTTCGAATCCATCAGTTTTAATTGGTGA 2112 0.3807 MMKSHTIIFLRIIFLLIFLGWLTVWILLPTKIYKNTWTPKLEIKLNSTYFREQGVNILLFTFPMMFIGALGCIYLHLQQEKITQKLPSTSSGALQKCLCYLRRPFLVMSSIGIVSAMELIFAIMFVALLIWSLYNYLSTSFGHLHMHKEGEKVWEAKFRSVFLRLGYIGNICWAFLFFPVTRGSSILRLVGLTSESSIKYHIWLGQLSMLLFAAHTIGFFIYWGITNQMVEALEWSKTYVSNVAGEIASLIALAMWITSIPRIRRKMYEVFFYTHHLYILYILFYAIHVGVEYMCMIAPGIFLFLIDRHLRFLQSRQHARLLSARILPCDALELNFSKDPSLHYNPTSLVFINVPKVSKLQWHPFTVSSSCNLETNYLSVTIKNVGSWSNKLYQELSSSSLDHLNVSVEGPYGPHSAQFLRHEQIVMVSGGSGITPFISIIRDLIFQSQQQEFQPPKLLLVCIFKNYVDLTMLDLMLPVSGATTQISQLQLQIEAYITREKEEPSRDTQKQIQTIWFKTNLSDSPISAVLGPNNWLWLGAIITSSFIMFLLLLGIVTRYYIYPIENNTGEVYNWTYKVMWYMFLLCACICMCSSVVFLWCKRQNTLENKQIMNVEVPTPTRSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFECEGKDVGVMVCGPRKLRHEVARICASGLADNLHFESISFNW* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2088 703 SUPERFAMILY Riboflavin synthase domain-like 311 396 IPR017938 -
Mal1g2088 703 PRINTS Cytochrome B-245 heavy chain signature 619 637 IPR000778 GO:0016020|GO:0016491
Mal1g2088 703 PRINTS Cytochrome B-245 heavy chain signature 243 266 IPR000778 GO:0016020|GO:0016491
Mal1g2088 703 PRINTS Cytochrome B-245 heavy chain signature 268 288 IPR000778 GO:0016020|GO:0016491
Mal1g2088 703 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 314 418 IPR017927 GO:0016491
Mal1g2088 703 Gene3D - 596 702 IPR039261 -
Mal1g2088 703 Gene3D - 411 532 IPR039261 -
Mal1g2088 703 Pfam Ferric reductase like transmembrane component 166 284 IPR013130 -
Mal1g2088 703 Pfam Ferric reductase NAD binding domain 422 687 IPR013121 GO:0016491
Mal1g2088 703 SFLD Ferric reductase subgroup (FRE) 9 703 - -
Mal1g2088 703 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 9 702 - -
Mal1g2088 703 CDD NOX_Duox_like_FAD_NADP 321 499 - -
Mal1g2088 703 Gene3D Translation factors 312 410 - -
Mal1g2088 703 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 423 698 IPR039261 -
Mal1g2088 703 SFLD Ferric Reductase Domain 29 703 - -
Mal1g2088 703 Pfam FAD-binding domain 320 415 IPR013112 GO:0016491
Mal1g2088 703 PANTHER NADPH OXIDASE 9 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2088 Mal-Chr1 27370556 27377219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2088 10 703 Miscellaneous Gene Families AT5G23980 59.344 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2088 K00521 - gmx:112998154 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2088 1 27370556 27377219 Mal1g2088 1 27370556 27377219 ECH