Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2083 ATGGACTCTCACACTCCTCTTCTCAACGGCACGGCGGCGTCTACGTCTGCGGAGTTATTGGAGGTTGACGGCGGTGACTACTTGGAAGTGAAGGGGTTTAAACAAGCGAGTAAGGTTTTTGCGATTGAAACAGCGAGAATATGGAAAATTGCATTGCCAATAGTTTTCAACATATTGTGTCAATATGGTGTAAACTCTATCACCAATATCTTCGTTGGTCATCTTGGTGATATTGAACTCTCTGCTATCTCTCTCATTAACTCTGTCATTGGAACTTTCGCTTTTGGCTTAATGTTAGGTATGGGGAGCGCAACCGAGACGCTCTGTGGTCAAGCTTTTGGAGCTGGACAGGTTCATATGCTCGGTGTTTACATGCAACGGTCGTGGATAATTTTATTTGTGACAAGTATTCTCCTATTACCAATATACATTTTTGCTGCTCCAATTTTGAAACTTCTTGGCCAACAGAAAGATATGGCTGATCTTGCTGGAAGTTTTGCTCTTTTAGTAATTCCTCAATTTCTCTCACTTTCCTTGAATTTTCCAACCCAAAAGTTCCTTCAGTCTCAAAGTAAGGTTAATGTCATTGCATGGATTGGGTTAGTGGCTCTAATTATGCATATAGGGTTGCTCTGGCTCTTGATTTATGTATTGGATTTAGGCTTAACCGGTGCAGCAATTGCATTCGATGTCACAAGTTGGGGAATTACGTTGACTCAACTTGTTTATGTGGTGGTTTGGTGTAAGGATGGTTGGAATGGATTGTCGTGGTTGGCTCTTAAGGATATATGGGCCTTTGTGAGGCTATCGGTTGCGTCAGCTGTTATGCTGTGCCTTGAAATTTGGTATATGATGAGCCTCATAGTTCTTGCTGGCCACCTTGATAATGCAATTATTGCTGTTGATTCCATCTCTATATGCATGAATTTCAATGGATGGGAAGGCATGATCTTCATTGGAGTAAATGCAGCTATAAGTGTCAGAGTTTCCAACGAACTTGGACTTCGACATCCAAGAGCTGCCAAATACTCTGTCTACGTGACAATCTTTCAATCTCTTTTGATGGGAATATTCTTCATGGGTGTAATTTTGCTAACTAAGAACTATTTTGCCATCATTTTTACCAATAGCCAGACTTTGCAAGCGGCGGTTGCAAAACTAGGAAACCTCCTTGCCGTGACTATGGTTCTAAACAGCGTTCAACCAGTGATTTCGGGTGTTGCTGTTGGAGGTGGGTGGCAGGCCTTGGTGGCTTACATCAATATAGGTTGTTATTACTTGTTTGGACTTCCACTTGGGTACATTCTTGGTTATATTGCAGAATTGGGGGTTAAGGGACTTTGGGGAGGTATGATATGTGGAATTCTCCTCCAGACCTTACTGCTCTTGGGGATACTTTACAAAACCAATTGGAACAAAGAGGTGGATGATACAACTGCACGCGTGCAACAATGGGGTGGACAAGCCATAGAAGTTGACAGCAATGGGGTGGACAAGCCATAG 1503 0.4258 MDSHTPLLNGTAASTSAELLEVDGGDYLEVKGFKQASKVFAIETARIWKIALPIVFNILCQYGVNSITNIFVGHLGDIELSAISLINSVIGTFAFGLMLGMGSATETLCGQAFGAGQVHMLGVYMQRSWIILFVTSILLLPIYIFAAPILKLLGQQKDMADLAGSFALLVIPQFLSLSLNFPTQKFLQSQSKVNVIAWIGLVALIMHIGLLWLLIYVLDLGLTGAAIAFDVTSWGITLTQLVYVVVWCKDGWNGLSWLALKDIWAFVRLSVASAVMLCLEIWYMMSLIVLAGHLDNAIIAVDSISICMNFNGWEGMIFIGVNAAISVRVSNELGLRHPRAAKYSVYVTIFQSLLMGIFFMGVILLTKNYFAIIFTNSQTLQAAVAKLGNLLAVTMVLNSVQPVISGVAVGGGWQALVAYINIGCYYLFGLPLGYILGYIAELGVKGLWGGMICGILLQTLLLLGILYKTNWNKEVDDTTARVQQWGGQAIEVDSNGVDKP* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2083 500 CDD MATE_eukaryotic 43 475 IPR045069 GO:0042910|GO:1990961
Mal1g2083 500 Pfam MatE 53 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal1g2083 500 Pfam MatE 273 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal1g2083 500 PANTHER PROTEIN DETOXIFICATION 25 481 - -
Mal1g2083 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 481 - -
Mal1g2083 500 TIGRFAM matE: MATE efflux family protein 53 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2083 Mal-Chr1 27274978 27278838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2083 K03327 - gmx:100799559 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2083 1 27274978 27278838 Mal1g2083 1 27274978 27278838 ECH
Mal8g3134 8 85436809 85441039 Mal1g2083 1 27274978 27278838 PCT