Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2080 ATGATGACAACATCGTTGGCAATTGCTTCTTCAACTTCAACCATGTTGTTATCTCCTAAACTAGGAACATGTTCAGTGTCACTGTCCACGACAAGCTCATATTCAAAAACCCAACATTTTTATCTCTATTCATTGGGTCAGCGTCATTTTGCACCTTGGAATGGTTTGAAGAATCTGGGTTTCTCAACTAAGCCCAAAAAATCACTTTTTCGTATTATAGATAGAAAGGGTCGGCCTAAGAGTAACGTGGTTTGTGCGTCTCTATTTGGGGTTGGTGCCCCTGAAGCTTTGGTAATTGGGGTTGTTGCTTTGTTGGTTTTTGGTCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGTGAATTTCAACCCACCATTAGAGAGATCCAGGACGTTTCAAGGGAATTTAAGAGTACCCTTGAACGGGAGATTGGTCTTGATGACATTTCAAACCCAACTCAGAACACATACTCTTCCAATGTTCGCAACACCACATCAGCTCCACCATCCACCAATAGTACCAATGGTTCTCAAACTGCTGTTGACCCTAATGGGAAGGCAGATCCAAGTAGAGCATACAGCTCTGAGGATTATCTAAAGATTACAGAGGAGCAACTAAAGGCAAATGCTGCCCAACAACAGGAGCAGACACTCCCTCCTAAAGAAGACAAAAGTGAACAGCAAATCCAGCCTCCTGCTACTGAAACAGCTGCAACTGTGCCACCACCTCAGAAGCCAGAAAGTGAATCCTTATCTTCGGATTCATAA 780 0.4333 MMTTSLAIASSTSTMLLSPKLGTCSVSLSTTSSYSKTQHFYLYSLGQRHFAPWNGLKNLGFSTKPKKSLFRIIDRKGRPKSNVVCASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIREIQDVSREFKSTLEREIGLDDISNPTQNTYSSNVRNTTSAPPSTNSTNGSQTAVDPNGKADPSRAYSSEDYLKITEEQLKANAAQQQEQTLPPKEDKSEQQIQPPATETAATVPPPQKPESESLSSDS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2080 259 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 8 253 - -
Mal1g2080 259 Gene3D - 88 137 - -
Mal1g2080 259 MobiDBLite consensus disorder prediction 152 188 - -
Mal1g2080 259 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 8 253 - -
Mal1g2080 259 MobiDBLite consensus disorder prediction 147 259 - -
Mal1g2080 259 Pfam mttA/Hcf106 family 91 141 IPR003369 GO:0015031
Mal1g2080 259 MobiDBLite consensus disorder prediction 210 259 - -
Mal1g2080 259 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 90 135 IPR006312 GO:0016021|GO:0043953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2080 - - gmx:100781301 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2080 1 27253152 27257210 Mal1g2080 1 27253152 27257210 ECH