Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2075 ATGTGGCCATTCAGCAAGAAAGGAGTTTCTGGATTTTCATGGAACTCAACTGCTGAACAAGTCACGAATGGAATCGATGCTACTGGTCTCACTGCCATTGTCACTGGAGCATCCAGCGGCATTGGTGCTGAGACTACTCGTGTGCTTGCTTTGCGTGGCGTTCATGTGATTATGGGCGTGAGAAATATGGTTGCTGCTAAAGATGTCAAAGATACAATACTCAAGGACATTCCCTCAGCTAAACTTGATGCCATCGAGTTAGATCTCAGCTCACTAGACTCTGTCAAGAAATTTGCATCCGAGTATAAGTCCTCTGGTCGTCCACTCAACATCTTGATAAATAATGCAGGAATTATGGCATGCCCTTTCAAGTTGTCCAAAGACAACATTGAACTACAGTTTGCCACCAATCACATAGGTCATTTTCTCTTGACAAATCTTTTGTTGGATACTATGAAGAAAACAACACGTGCAAGTAAGAAAGAAGGAAGAATTGTTAATGTCGCCTCAGAGGCTCACAGATTCGCATATTCTGAAGGAATCCGTTTTGATAAAATCAATGATGAATCAAGTTACAGTAAATGGGGTGCATATGGACAGTCAAAGCTTGCTAACATTTTACATGCCAACCAACTTTCAAAACATCTCAAGGAAGATGGTGTGGATATTACTGCGAATTCTCTTCATCCAGGAACAATTGTTACCAATCTTTTCCGACATAACAATGCAGTGAACGGCCTAATAAATGTGGTTGGGAGACTTGTGATGAAAAATGTCCAGCAGGGAGCAGCTACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAGTTAGTGGTGAATATTTTTCAGACAGTAATGTGCACAAAACAACCCCACATGGGAGGGACGCTGATTTGGCAAAGAAACTTTGGGATTTCAGCATCAATTTGGTTAAACAGAAATAG 948 0.4156 MWPFSKKGVSGFSWNSTAEQVTNGIDATGLTAIVTGASSGIGAETTRVLALRGVHVIMGVRNMVAAKDVKDTILKDIPSAKLDAIELDLSSLDSVKKFASEYKSSGRPLNILINNAGIMACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRASKKEGRIVNVASEAHRFAYSEGIRFDKINDESSYSKWGAYGQSKLANILHANQLSKHLKEDGVDITANSLHPGTIVTNLFRHNNAVNGLINVVGRLVMKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVHKTTPHGRDADLAKKLWDFSINLVKQK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2075 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Mal1g2075 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Mal1g2075 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Mal1g2075 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Mal1g2075 315 PANTHER RETINOL DEHYDROGENASE 2 314 - -
Mal1g2075 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 291 IPR036291 -
Mal1g2075 315 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Mal1g2075 315 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 IPR002347 -
Mal1g2075 315 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 171 IPR002347 -
Mal1g2075 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Mal1g2075 315 Gene3D - 20 315 - -
Mal1g2075 315 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 2 314 - -
Mal1g2075 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2075 Mal-Chr1 27215909 27220038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2075 33 286 Acyl Lipid Metabolism Gene Families AT3G55310 29.368 3.20e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2075 - - gmx:100784001 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2075 1 27215909 27220038 Mal1g2075 1 27215909 27220038 ECH