Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1982 ATGGTGTTTGATGCAACTTTGATGTTGTTGAACAAACTAATTTTATGTGCAAGAACAAAGAGTGCTCCAAAGTACACATTTATCAAAGAAGCAACATTTGCTCCACCAACCTTAACATATGACTACATAGTCATAGGTGGAGGAACATGTGGTTGTCCACTAGCAGCAACACTTTCACAAGGTGCAAAAGTTTTGGTCCTTGAAAGAGGAGGTTCACCATATACAAATCCAGAACAAATCAACATACATAACTTTGTTAATTCCCTTGCCGACACAAGTCCTTCATCATTTTCCCAACAGTTCATATCAACCGACGGTGTCCTCAATACTCGGGCGCGCGTCCTAGGAGGCGGTTCTGTCTTGAATGCTGGATTCTACTCAAGGGCTAGCGATAGGTACATAAGAGAATCTGGTTGGAATGAAACTTTGGCTAAGAGTTCATATGAATGGGTTGAAAAGAAGGTTGCTTTTGAGCCTGAAATGATGCAATGGCAATCAGCAGTGAGGGATGGTTTACTTGAAGCAGGGGTTTTACCTTACAATGGTTTTACTTTTGATCACTTATATGGGACTAAGGTTGGAGGGACAATTTTTGATGAGGAAGGTCATAGACACACTGCAGCTGATTTGTTAGAGTATGCTGATCCAAGGAGCATTTCTGTTTATTTGCATGCCACAGTTCAAAAGATACTATTTAAGTATAATGCCGAAAAAGGGAGGCCACAAGCATATGGAGTGATATTCAAAGATTCATTGGGGATCATACATAGAGCATACATAAGCTCTAAAGTGAAGAATGAAATAATAGTATCAGCTGGTGCTATTGGAAGTCCACAGTTGCTGATGCTAAGTGGCATTGGTCCTGCTAACCATCTTAAGGAACATGGAATTCAAGTGGTTTTGGATCAGCCTTTGGTAGGTCAAGGGATGGCAGATAATCCAATGAATATTCTAGTCGTTCCTTCGCCTCTACCTGTTGAAGTTTCTATGATTGAAACAGTTGGAGTCACCAAGTTTGGTAGCTTCATTGAAACAGCCAGTGGATTGAGCTTTGGTCATTCTTGGTCTGATAGACTTAGAGGAATTTTTGAATTTGTGTCAAACCAGAGTGGCAAATCCTCCAGGTTTACACCAGAAGCCATGGAAAGTTCTGCAGACACAATTAAATCATTAGCCAATCCAATTCTCAAAGGAGGAATCATACTTGAAAAGATAATGGGACCAAGATCCACAGGTCACCTAGAACTTCTAACAACTAATCCCAATGATAATCCATCAGTTACCTTCAACTATTTCAAGGATCCAGAAGACTTGAGAATGTGTGTGGAAGGCATGAAAACAATCATAAATGTGATTAACTCAAAAGCATTCTCAAAATTTCGCTATCACAACATGCCTGTTCAAGCTCTAATAGACTTAATGTTGCTTTTACCAGTTAATTTGAGACCAAAACATCCTAGTGCTGCATTTTCTTTGGAACAATATTGCATTGATACTGTCTTAACAATTTGGCATTATCATGGAGGTTGCCAATATGGTAAAGTTGTTGATCATAATTATAAGGTCATTGGCGTGGAAGCTCTTAGAGTTATTGATGGATCGACTTTTTATCGCGCGCCGGGGACTAATCCTCAAGCTACTGTAATGATGCTTGGAAGGTATATGGGACAAAAGATTATAAAGAAAAGATTATCCCAGGGGAGGTAG 1707 0.3966 MVFDATLMLLNKLILCARTKSAPKYTFIKEATFAPPTLTYDYIVIGGGTCGCPLAATLSQGAKVLVLERGGSPYTNPEQINIHNFVNSLADTSPSSFSQQFISTDGVLNTRARVLGGGSVLNAGFYSRASDRYIRESGWNETLAKSSYEWVEKKVAFEPEMMQWQSAVRDGLLEAGVLPYNGFTFDHLYGTKVGGTIFDEEGHRHTAADLLEYADPRSISVYLHATVQKILFKYNAEKGRPQAYGVIFKDSLGIIHRAYISSKVKNEIIVSAGAIGSPQLLMLSGIGPANHLKEHGIQVVLDQPLVGQGMADNPMNILVVPSPLPVEVSMIETVGVTKFGSFIETASGLSFGHSWSDRLRGIFEFVSNQSGKSSRFTPEAMESSADTIKSLANPILKGGIILEKIMGPRSTGHLELLTTNPNDNPSVTFNYFKDPEDLRMCVEGMKTIINVINSKAFSKFRYHNMPVQALIDLMLLLPVNLRPKHPSAAFSLEQYCIDTVLTIWHYHGGCQYGKVVDHNYKVIGVEALRVIDGSTFYRAPGTNPQATVMMLGRYMGQKIIKKRLSQGR* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1982 568 Pfam GMC oxidoreductase 408 553 IPR007867 GO:0016614
Mal1g1982 568 Gene3D - 157 502 - -
Mal1g1982 568 SUPERFAMILY FAD/NAD(P)-binding domain 34 562 IPR036188 -
Mal1g1982 568 PANTHER OSJNBA0019K04.7 PROTEIN 10 563 - -
Mal1g1982 568 SUPERFAMILY FAD-linked reductases, C-terminal domain 310 509 - -
Mal1g1982 568 ProSitePatterns GMC oxidoreductases signature 2. 273 287 IPR000172 GO:0016614|GO:0050660
Mal1g1982 568 Pfam GMC oxidoreductase 40 314 IPR000172 GO:0016614|GO:0050660
Mal1g1982 568 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 10 563 - -
Mal1g1982 568 PIRSF Alcohol_oxidase 20 567 IPR012132 GO:0050660
Mal1g1982 568 Gene3D - 40 552 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1982 Mal-Chr1 26027075 26030062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1982 16 563 Miscellaneous Gene Families AT5G51950 61.552 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1982 - - gmx:100780453 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1982 1 26027075 26030062 Mal1g1982 1 26027075 26030062 ECH