Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1959 ATGGCTTTCTGTTACAGACTCAACAACTTCACCATCTCTGCATTCAAACCTCAAAACTCAAATGTCTCACTTTCAATTCAATCTTCTTTCAATCTCCAATCTCCTTCTTCCTTCAAACTTCATAACTTTCCTTTAAGACTTCGCTATAATTCAACCATCAGAGCCACTTCTTCATCCTCTTCTCCTGCAACCATTGCTGAACCTCAAGGCATTAAGATTAACTCTATTCCTACCAAACCTATTGAAGGACAAAAAACTGGTACAAGTGGTCTACGAAAAAAGGTGAAAGTGTTTATGCAAGAAAATTACCTTGCAAATTGGATTCAGGCACTGTTTAATTCATTGCCTCCGGAGGATTACAAAAATGGAGTGTTGGTGTTGGGAGGTGATGGTCGATACTTTAATCGCGAAGCTGCACAGATAATAGTCAAAATTGCTGCTGGAAATGGTGTTGGGAAAATTCTGGTTGGAAAGGAAGGGATATTGTCAACACCAGCCGTTTCTGCTGTGATAAGGAAGAGGCAGGCGAATGGTGGATTTATTATGAGTGCAAGCCATAATCCTGGTGGTCCTGAATATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTACGGAAACACCCTATCTATTTCTGAGATAAAGATTGCTGACATTCCTGACGTTGACTTATCAAATGTTGGGGTTACAAAATTTGGAAGCTTCAGTGTGGAAGTAATAGATCCAGTTTCTGATTATCTGGAGCTATTGGAGACAGTATTTGATTTTCAGCTAATCAAAGGTCTTATTTCACGGCCAGATTTTAGGTTTACATTTGATGCCATGCATGCAGTTGCTGGTGCTTATGCAACACCCATCTTTGTTGATAAACTTGGTGCTACTCCGGATTCAATTTCAAATGGAATACCTTTGGAAGATTTTGGACATGGTCATCCTGATCCTAATCTAACATATGCAAAGGATCTTGTCAACATTATGTATGCTGAAAACGGACCTGATTTCGGAGCTGCTAGTGATGGTGATGGGGATAGAAATATGATTTTAGGAACGAGTTTCTTCGTAACACCTTCAGACTCTGTAGCGGTTATTGCAGCCAATGCAAAAGAAGCAATTCCATACTTCAAGAACAGTGTTAAGGGTCTTGCACGATCAATGCCGACAAGTGGTGCTCTGGATAGAGTTGCTGAAAAGTTGAACCTCCCTTTCTTTGAGGTTCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAATTTGTCAATTTGTGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATTCGTGAGAAAGACGGAATCTGGGCTGTATTAGCATGGCTTTCTATTATTGCTCACCGCAACAAAGACACGAAACCAGGGGAGAAATTGATCTCTGTATCTGATGTTGTAAAGGAACATTGGGCAACCTATGGTAGAAATTTCTTTTCTAGATATGACTACGAGGAATGTGAATCCGAAGGCGCCAATAAGATGATAGAGTATCTACGAGAGTGTTTGTCTAAGAGCAAGGCCGGTGATAAGTATGGAAGTTATGTCCTCCAGTTTGCAGATGATTTTACGTACACTGATCCTGTAGATGGAAGTGTGGTATCAAAACAAGGGGTTCGGTTTGTTTTTACGGATGGTTCAAGGATTATTTATCGTTTATCAGGAACGGGTTCTGCCGGTGCAACTGTTAGAGTGTACATTGAACAGTTTGAACCAGATGTTTCTAAACACGACCTTGACGCTCAATTTGCCTTGAAACCATTAATAGATTTAGCATTATCGGTTTCAAAGCTCAAAGAGTTCACAGGGAGAGAGAAGCCTACAGTCATCACTTAA 1884 0.4055 MAFCYRLNNFTISAFKPQNSNVSLSIQSSFNLQSPSSFKLHNFPLRLRYNSTIRATSSSSSPATIAEPQGIKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGVLVLGGDGRYFNREAAQIIVKIAAGNGVGKILVGKEGILSTPAVSAVIRKRQANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSNVGVTKFGSFSVEVIDPVSDYLELLETVFDFQLIKGLISRPDFRFTFDAMHAVAGAYATPIFVDKLGATPDSISNGIPLEDFGHGHPDPNLTYAKDLVNIMYAENGPDFGAASDGDGDRNMILGTSFFVTPSDSVAVIAANAKEAIPYFKNSVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDTKPGEKLISVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRECLSKSKAGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDLDAQFALKPLIDLALSVSKLKEFTGREKPTVIT* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1959 627 CDD PGM1 76 627 - -
Mal1g1959 627 SUPERFAMILY Phosphoglucomutase, C-terminal domain 492 627 IPR036900 GO:0016868|GO:0071704
Mal1g1959 627 SUPERFAMILY Phosphoglucomutase, first 3 domains 351 497 IPR016055 GO:0005975|GO:0016868
Mal1g1959 627 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 367 490 IPR005846 GO:0005975|GO:0016868
Mal1g1959 627 SUPERFAMILY Phosphoglucomutase, first 3 domains 73 285 IPR016055 GO:0005975|GO:0016868
Mal1g1959 627 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 50 627 - -
Mal1g1959 627 Gene3D - 364 462 - -
Mal1g1959 627 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 84 223 IPR005844 GO:0005975|GO:0016868
Mal1g1959 627 Gene3D - 261 363 - -
Mal1g1959 627 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 256 359 IPR005845 GO:0005975
Mal1g1959 627 Gene3D - 473 627 - -
Mal1g1959 627 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 50 627 IPR045244 GO:0004614|GO:0005975
Mal1g1959 627 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 550 602 IPR005843 GO:0016868|GO:0071704
Mal1g1959 627 Gene3D - 72 260 - -
Mal1g1959 627 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 179 188 IPR016066 GO:0000287
Mal1g1959 627 PRINTS Phosphoglucomutase/phosphomannomutase family signature 278 297 IPR005841 GO:0005975|GO:0016868
Mal1g1959 627 PRINTS Phosphoglucomutase/phosphomannomutase family signature 314 327 IPR005841 GO:0005975|GO:0016868
Mal1g1959 627 PRINTS Phosphoglucomutase/phosphomannomutase family signature 178 192 IPR005841 GO:0005975|GO:0016868
Mal1g1959 627 PRINTS Phosphoglucomutase/phosphomannomutase family signature 343 358 IPR005841 GO:0005975|GO:0016868
Mal1g1959 627 SUPERFAMILY Phosphoglucomutase, first 3 domains 255 364 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1959 Mal-Chr1 25767266 25773516 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1959 K01835 - gmx:100802730 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1959 1 25767266 25773516 Mal1g1959 1 25767266 25773516 ECH