Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1789 ATGGCGAAAAACATGATTCATTCATGTTTTCTTCTGTTTTTCTTTTGTTTCTTACAGAATCAGATTATTCTAAACGCGATTCTAGACCCAACAGATTTTCTAGCTCTTCAATCAATTCGTAAAGCTCTTGAAGACATGCCTGGTTCTGATTTCTTCTCTTCATGGGATTTCACTGCTGATCCATGCAACTTCTCCGGCGTTTTCTGCGATTCTGATAAAGTCATTGCTCTCAACCTTGGTGATCCTAGAGCCGGTTCAGCCGGTTTAACCGGTCGACTCGACCCGGCTATAGGTAAACTCTCTTCTCTTGCTGAGTTTACCGTTGTTCCGGGAAGAATCTATGGTCCTCTTCCTCAAACCATTTCAAGCTTGAAGAATCTTAGGTTTCTTGGTGTTAACAGAAACTTCATCTCCGGTGAGATTCCGGCGGAGTTGGGTGAGTTACGAAGTCTTCGAACTATTGATCTTAGTTACAATCAGCTCACCGGAAAAATTCCTCCGACGGTGGGTTCATTACCGGGGTTAACCAATCTCATTCTCTGTCACAACCGTTTATCCGGTTCACTTCCCCGGTTCGATTCTCAAAGCTTGAGCCGGTTGGACCTAAAGCACAACTCTCTCACCGGTTCGATTGCTCCAAATTTTCTCCCTCCGTCTCTGCAGTATCTCTCATTGTCGTGGAATCAACTCACCGGTTCAATGGACCGGGTTTTAACCCGGCTCAACCAGTTAAACTATTTAGACCTGAGCTTGAACCAGTTTACTGGACCTGTTCCGGGTAAGGTATTCTCATTTCCACTAACCAATCTCCAATTAGAAAGAAACCAGTTTACCGGTTCAGTTGAACCGGTGGATCAAGTTGCAATCCCCACCGTTGATCTTAGCTACAACCGGTTATCAGGTCAAATATCACCTATGCTAGCTAGTGTGCAGAATCTTTACCTGAATAACAACCGGTTCACGGGTCGGGTACCGGCTAGTTTTGTGGACCGGTTATTGGATGCAAGTATACAGATATTATATTTGCAGCATAATTATTTGACTGGAATTGAGATTAGTCCAACGGCTGTGATTCCAGAGAGAAGCTCACTGTGTATGCAGTATAATTGCATGGTCCCTCCCGTAGAGACTCCCTGCCCTTTGAGAGCTGGGAAGCAGAAAACAAGGCCTACTACACAGTGCAATCAGTACAAGGGATGA 1200 0.4475 MAKNMIHSCFLLFFFCFLQNQIILNAILDPTDFLALQSIRKALEDMPGSDFFSSWDFTADPCNFSGVFCDSDKVIALNLGDPRAGSAGLTGRLDPAIGKLSSLAEFTVVPGRIYGPLPQTISSLKNLRFLGVNRNFISGEIPAELGELRSLRTIDLSYNQLTGKIPPTVGSLPGLTNLILCHNRLSGSLPRFDSQSLSRLDLKHNSLTGSIAPNFLPPSLQYLSLSWNQLTGSMDRVLTRLNQLNYLDLSLNQFTGPVPGKVFSFPLTNLQLERNQFTGSVEPVDQVAIPTVDLSYNRLSGQISPMLASVQNLYLNNNRFTGRVPASFVDRLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCMQYNCMVPPVETPCPLRAGKQKTRPTTQCNQYKG* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1789 399 PANTHER LRR RECEPTOR-LIKE KINASE 8 396 - -
Mal1g1789 399 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 396 - -
Mal1g1789 399 Pfam Leucine Rich repeat 218 232 IPR001611 GO:0005515
Mal1g1789 399 SUPERFAMILY L domain-like 29 371 - -
Mal1g1789 399 Pfam Leucine Rich Repeat 150 172 IPR001611 GO:0005515
Mal1g1789 399 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Mal1g1789 399 Gene3D Ribonuclease Inhibitor 195 371 IPR032675 -
Mal1g1789 399 Gene3D Ribonuclease Inhibitor 31 194 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1789 Mal-Chr1 23452106 23453305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1789 35 349 Receptor kinase-like Gene Family AT5G62230 31.928 3.57e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1789 - - gmx:100800224 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1789 1 23452106 23453305 Mal1g1789 1 23452106 23453305 ECH
Mal3g3685 3 114294343 114295521 Mal1g1789 1 23452106 23453305 PCT