Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1576 ATGGGGTTCCAAGATTTGATATCGAGACCATTGATGTATTTCATAGTGACATTGGTTATTTTTCAACAAGCAAATAGCCAAAGAGTTAAGGTTGGTGCCGGTTTCGTTCAAAGAAATGGAACCCATTTTATTATGAATGGGAAGCCACATTATGTGAATGGTTTCAATTCATATTGGTTGATGATCATGGCATCTGATCCATCTACAAGGTCCAAGGTCACTTCCAATTTTCAACAAGCTTCTCGACATGGCTTAAATGTAGGAAGAACATGGGCTTGCAATGATGGAGGTTACAAAGCTCTTCAAATTTCTCCCGGTTCTTACGATGAAAATGTCTTCAAGGGATTGGATTTTGTGATATCAGAGTCAAGAAAATACGGAGTGCAACTTATACTTGGCTTAGTGAATAATTGGAATGATTTGGGAGGCAAAAATAAATATGTTCAATGGGCAAGAGAACGTGGTCAAAATGTCACAAGTGACAATGACTTTTTTACACACCCAGCTGTTAAGCAATACTACAAAAACCATGTTAAGGCTGTGCTGACAAGAAATAACACTATAAATGGGGTGTTATACAAGGATGACCCAACTATTTTTGCTTGGGAGCTTATAAATGAACCACAATATGTAAATGACTCCGGAAAATCAATCCAGAAATGGGTTAGTGAAATGGCAACCTATGTCAAATCCATTGATAGCAATCATTTGCTGGAAATAGGGCTTGAAGGGTTCTATGGTGAAACAATGCCACAAAAGAAGCAATTCAATCCTAATACTAATCAAGTCGGAACTGATTTTATCTCCAACAATCAAATTCCTCAAATCGATTTTGCCACCATTCATGTATACCCTGATGAATGGTTACAGGGCTCAAACGAGACAACTAAAAGTGCCTTTGTTGACAAATGGATAGAAGCTCATATTGAGGACTCAAATACTATTTTAAAAAAGCCTTTGATTATAGCAGAGTTTGGAAAGTCTTCAAAATCACTTGGATATAACATAGCTATAAGGGATAGTTACTTTAAGAAAGTATACAATGCCATATCTACAAGTGCTATCAGTGGAGGCTCATGTGCAGGTGGGATTTTCTGGCAACTCATGTCTCAAGGAATGGATAATTATGGAGATGGCTTTGAAGTCATTTTTGAGAATAGTCCTTCAACTGGCGAGATCATCAAACAACAATCTATGAAGATGTCAAATATCAAATAA 1218 0.3695 MGFQDLISRPLMYFIVTLVIFQQANSQRVKVGAGFVQRNGTHFIMNGKPHYVNGFNSYWLMIMASDPSTRSKVTSNFQQASRHGLNVGRTWACNDGGYKALQISPGSYDENVFKGLDFVISESRKYGVQLILGLVNNWNDLGGKNKYVQWARERGQNVTSDNDFFTHPAVKQYYKNHVKAVLTRNNTINGVLYKDDPTIFAWELINEPQYVNDSGKSIQKWVSEMATYVKSIDSNHLLEIGLEGFYGETMPQKKQFNPNTNQVGTDFISNNQIPQIDFATIHVYPDEWLQGSNETTKSAFVDKWIEAHIEDSNTILKKPLIIAEFGKSSKSLGYNIAIRDSYFKKVYNAISTSAISGGSCAGGIFWQLMSQGMDNYGDGFEVIFENSPSTGEIIKQQSMKMSNIK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1576 405 Pfam Cellulase (glycosyl hydrolase family 5) 47 352 IPR001547 GO:0004553|GO:0071704
Mal1g1576 405 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 13 404 - -
Mal1g1576 405 SUPERFAMILY (Trans)glycosidases 35 386 IPR017853 -
Mal1g1576 405 Gene3D Glycosidases 32 405 - -
Mal1g1576 405 PANTHER - 13 404 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1576 Mal-Chr1 20600554 20603805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1576 34 405 Glycoside Hydrolase AT5G66460 56.568 7.44e-157 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1576 K19355 - gmx:100791612 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1576 1 20600554 20603805 Mal1g1576 1 20600554 20603805 ECH