Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1575 ATGGGGTTCCAAATTTTGGTATTGACGTATTTCCTAGTGGCTTTGGGTGTTATTCAACATGGGAACACCCAAAGAGTTAACGTTGGTGCCGGTTTCGTGCAAAGAAATGGAACCCATTTTATTATGAATGGGAAGCCACATTATGTGAATGGTTTCAATTCATATTGGTTGATGATCATGGCATCTGATCCATGTACAAGTTCTAAGGTCACTTCAACTTTTCAACAAGCTTCTCAACATGGCTTAAATGTAGGAAGAACATGGGCTTTCAATGATGAAGGTTATAAAGCCCTTCAAATCTCTCCTGGTTCTTACGATGAAAATGTCTTTAAGGGATTGGATTTTGTGATATCAGAGGCAAACAAATATGGAGTGCGACTTATACTAAGCATGGTTAACAATTGGAAAGATTTTGGAGGAAAGAATAAATATGTGCAGTGGGCAAGAGAACGTGGTCAAACTATAAAGAATGACGATGAGTTCTTTACACATCCCGTTTTTAAGCAATACTATAAAGACCATGTTAAGGCTGTGTTGACAAGAAAGAACAGCATAAATGGGATTTTATACAAGGATGACCCAACAATTTTTGCTTGGGAACTTATGAACGAACCTCGTGTACGTGACTATGTAAAGCCCATTATTGTACAAGAGTTTGGGAAGTCTTCAAGGTTACCTGGATATAGCACAGATCAAAGGGACAATTACTTCAACAAAATTTATAGTGCCATATCTACAAGTGCTACTAGTGGAGGCTCATGTGCGGGCATGGGGTTCAAAATTTTGGTATTGACGTATTTTCTAGTGGCTTTGGCTGTTATCCAACATGGGAATACCCAAAGAGTTAATGTTGGTGCTGGTTTTGTTCAAAGAAAAGGCACCCATTTTATCTTGAATGGGAAGACACACTATGTGAATGGATTCAATTCTTATTGGTTAACGACCATGGCATCCGATCCATCTACAAGTTCTAAAGTCACTTCCACTTTCCAACAAGCTTCTCAACATGGCTTAAATGTAGGAAGAACATGGGCATTCAATGATGGAGGTTATAAAGCCCTTCAAATCTCTCCAGGTTCTTATGACGAAAATGTCTTCAAGGGATTGGATTTTGTGATATCTGAGGCAAGCAAATATGGTGTGCAACTTATACTGAATTTGGCGAATAATTGGAATGATTTTGGAGGCAAAAACAAATATGTGCAATGGGCAAGAGAACGCGGTCAAACTATCGAAAATGATGATGACTTCTTTACAGACCCTATTGTCAAGCAATACTACAAAAATCATGTTAAGGCTGTGCTGACAAGAAGAAACACCATTAGTGGTGTGTTATACAAGGATGACCCAACTATTTTTGCTTGGGAGCTTATGAATGAACCTCGTTATGTAAATGACTCCGGAAAATCAATTCAGAATTGGGTTAGTGAGATGGCTGCATATGTCAAATCCATTGATAACAATCATTTGCTGGAAATAGGGCTTGAAGGGTTCTATGGTGAAACAATGCCACAAAAGAAGCAATTCAATCCTAATACTAATCAAGTCGGAACTGATTTTATCTCCAACAATCAAATTCCTCAAATTGATTTTGCCACCATTCATATATACCCTGATCAATGGTTACAAGGCTCGGACGAGACAGCCCAAAATGCATTTGTTGACAAATGGATAGAAGCACATATTGAGGATTCAAATGTTGTTTTAGGAAAGCCTATTATTATAGCAGAGTTTGGAAAATCTTCAAAGTCACCTGGATATAGCATAGATAAAAGGGACAGTTACTTTAACAAAGTATACAATGCTATATCTACAAATGCTATCAGTGGAGGCTCATGTGCAGGTGGGATTTTCTGGCAACTCATGTCTCAAGGAATGGATAGCTATGGAGATGGGTATGAAGTCATTTTTGAGAATAGTCCTTCAACTTCCGAAGTCATTAAACAACAATCTATAAAAATGTCACATATCAAATAG 1977 0.3789 MGFQILVLTYFLVALGVIQHGNTQRVNVGAGFVQRNGTHFIMNGKPHYVNGFNSYWLMIMASDPCTSSKVTSTFQQASQHGLNVGRTWAFNDEGYKALQISPGSYDENVFKGLDFVISEANKYGVRLILSMVNNWKDFGGKNKYVQWARERGQTIKNDDEFFTHPVFKQYYKDHVKAVLTRKNSINGILYKDDPTIFAWELMNEPRVRDYVKPIIVQEFGKSSRLPGYSTDQRDNYFNKIYSAISTSATSGGSCAGMGFKILVLTYFLVALAVIQHGNTQRVNVGAGFVQRKGTHFILNGKTHYVNGFNSYWLTTMASDPSTSSKVTSTFQQASQHGLNVGRTWAFNDGGYKALQISPGSYDENVFKGLDFVISEASKYGVQLILNLANNWNDFGGKNKYVQWARERGQTIENDDDFFTDPIVKQYYKNHVKAVLTRRNTISGVLYKDDPTIFAWELMNEPRYVNDSGKSIQNWVSEMAAYVKSIDNNHLLEIGLEGFYGETMPQKKQFNPNTNQVGTDFISNNQIPQIDFATIHIYPDQWLQGSDETAQNAFVDKWIEAHIEDSNVVLGKPIIIAEFGKSSKSPGYSIDKRDSYFNKVYNAISTNAISGGSCAGGIFWQLMSQGMDSYGDGYEVIFENSPSTSEVIKQQSIKMSHIK* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1575 658 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 10 208 - -
Mal1g1575 658 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 212 259 - -
Mal1g1575 658 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 266 657 - -
Mal1g1575 658 SUPERFAMILY (Trans)glycosidases 29 244 IPR017853 -
Mal1g1575 658 Pfam Cellulase (glycosyl hydrolase family 5) 308 608 IPR001547 GO:0004553|GO:0071704
Mal1g1575 658 PANTHER - 10 208 IPR045053 GO:0004553
Mal1g1575 658 PANTHER - 212 259 IPR045053 GO:0004553
Mal1g1575 658 PANTHER - 266 657 IPR045053 GO:0004553
Mal1g1575 658 Gene3D Glycosidases 29 209 - -
Mal1g1575 658 Gene3D Glycosidases 285 658 - -
Mal1g1575 658 Gene3D Glycosidases 210 259 - -
Mal1g1575 658 SUPERFAMILY (Trans)glycosidases 288 641 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1575 Mal-Chr1 20590073 20598326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1575 260 658 Glycoside Hydrolase AT5G66460 56.328 9.33e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1575 K19355 - gmx:100791612 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1575 1 20590073 20598326 Mal1g1575 1 20590073 20598326 ECH