Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1538 ATGGCCAAGGAAGCTTCTTTCTGCCTCTTGTTTCTTCTTACTTCTCTCTTAATTTCATGTTCTGGAGCTTTGGTGGGTTTTTCCTATCATGAGAGAGGAGGCACTTGGACATCATTCCTTCAGAAGAGCAAGTTTTCTTCTTCTCAGATTCGAGTTTTCGTCTCAGATCATAGAATTTTGAGCACTCTCACCAACTCAAAAGTGTTCGTTGATCTCTACTTAAACAAAATCAAAGTTGAAAATTTCATTACTTCAAAACCTTCAGCTATTTCTGAGCTAAAAGCTCAACTAGTGAACTTTCTTCCACATATAAACATCAAAAGCATCATTCTAAGCTGTGGAAGTGAGTGCTTAGTACAAAATGAGATACCTTTGATTAGGCATGCTCTTAAATCAATTCATTCAATTCTCAATGATCTTCACATAAGTAAAGAAGTAAAAGTCTCGGTCGCATTTCCACTTCAATTCTTAAGGAAGTTGAATGCATCACAAGAACACGAAATTCGTAGATTACTTTCATTTATGAAGGAAGTGAAATCGTTTGTGATGATAGAAGACAGCATTGATGCAGAATTAAGCATGGATGATCATTTTGTTCAAACAATTATGAATCGCGCTAATCTTGCAGCTTCTGTTCTTCCTTGCAATGATGTTCCTGTGGTTCTTACAATCAAGAGTTCAGTTATACCAAGTTCAATGGAAGTAGCTCAATTTAGTAAAAGAGTATCCAAACATTTAGATGCAAAAAGGATAGCTGCATTATATGTAGAACTGCATACAACAGAAGATTCTTCATGGAAAGAGCTCAAAAGGGAAGAGGAAGAAATGTTTCCTTTGTCTAGAAGAGAGATCTTAAGCAAATTCCACAGAAGAAAAATTTTAGATAACACAAACAGTCCAACAAACACAGTTTACCCTACAAATCCAACACCAGTTATTACACCCTCAGATACACCAACCATTATAGCAGTTCCTTCTACAAATCCTGTCACAATTTCCCCTACAAATCCAGCTGCAATGCCTGTAACAGTTCCTTCTACTACACCTGTTCCTTTACCTCCAACAAATCCAACCACTTCACCAGTACCAGTCTTCAATCCAGCTACAACTCCTACAACAGTTCCAGGTGCACCACCAGTAACATCTTATCCACCTCCAGTAACATCTTATCCACCTCCAACAGGAACTGTTCCTGTCAACAACCCTCCTTCAAACACAAATGCTCCTTCCATTCAAGGACAGAGTTGGTGTGTGGCGAAAACAGGTGCTCCACAAGCTTCCCTTCAATCAGCATTGGATTATGCTTGTGGAAATGGTGCTGATTGTTCTCAAATACAACAGGGTGCAAGTTGTTTTAGTCCAGTTACTTTGCAGAACCATGCTTCTTTTGCCTTCAACAGTTACTATCAAAAGAAGCCAGCTCCAACAAGTTGCGACTTTGGAGGCGCTGCTATGTTAGTTAACACAAATCCAAGTTCTGGCTCTTGCATTTATCCGTCATCATCTTCGTCGTCGTCATCATCCTCAACTTCACCAATGATATCATCTCCAACACCACCTACACAATCAACTCCAACTTCAATACCACCACCAAGTCTAACAACACCTTCACCATCTATTCCAACAATAGCTCCACCAACAATATCAACAGCTCCATCATCAATTCCGACAGCTCCACCAACATCTTCAGGATCAGGAGCAGGCACTTTCGGCTATGGTACCCCACCTTCAGTGTTAAATTCAAGCAACCCAGCTTCAGGTACAATGCCAGATTTTGGGTCTGATAGCCCTCCTGTTGTAAACACAACATCGGCCTCGCACCCTCGAGCTCTGAAACCTTTTACTGGCTGTATGGTCTTGATGATTCCATTTGTCACTGCAAGACTCAGCATGCGCCCATAG 1902 0.4059 MAKEASFCLLFLLTSLLISCSGALVGFSYHERGGTWTSFLQKSKFSSSQIRVFVSDHRILSTLTNSKVFVDLYLNKIKVENFITSKPSAISELKAQLVNFLPHINIKSIILSCGSECLVQNEIPLIRHALKSIHSILNDLHISKEVKVSVAFPLQFLRKLNASQEHEIRRLLSFMKEVKSFVMIEDSIDAELSMDDHFVQTIMNRANLAASVLPCNDVPVVLTIKSSVIPSSMEVAQFSKRVSKHLDAKRIAALYVELHTTEDSSWKELKREEEEMFPLSRREILSKFHRRKILDNTNSPTNTVYPTNPTPVITPSDTPTIIAVPSTNPVTISPTNPAAMPVTVPSTTPVPLPPTNPTTSPVPVFNPATTPTTVPGAPPVTSYPPPVTSYPPPTGTVPVNNPPSNTNAPSIQGQSWCVAKTGAPQASLQSALDYACGNGADCSQIQQGASCFSPVTLQNHASFAFNSYYQKKPAPTSCDFGGAAMLVNTNPSSGSCIYPSSSSSSSSSSTSPMISSPTPPTQSTPTSIPPPSLTTPSPSIPTIAPPTISTAPSSIPTAPPTSSGSGAGTFGYGTPPSVLNSSNPASGTMPDFGSDSPPVVNTTSASHPRALKPFTGCMVLMIPFVTARLSMRP* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1538 633 SMART X8_cls 415 498 IPR012946 -
Mal1g1538 633 MobiDBLite consensus disorder prediction 518 545 - -
Mal1g1538 633 MobiDBLite consensus disorder prediction 497 517 - -
Mal1g1538 633 Pfam X8 domain 416 485 IPR012946 -
Mal1g1538 633 MobiDBLite consensus disorder prediction 546 609 - -
Mal1g1538 633 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Mal1g1538 633 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 140 598 - -
Mal1g1538 633 MobiDBLite consensus disorder prediction 497 610 - -
Mal1g1538 633 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 140 598 IPR044965 GO:0004553|GO:0005975
Mal1g1538 633 Gene3D - 410 514 - -
Mal1g1538 633 Gene3D Glycosidases 25 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1538 Mal-Chr1 20033233 20035393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1538 389 501 Glycoside Hydrolase AT2G05790 52.586 1.40e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1538 - - cam:101499863 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1538 1 20033233 20035393 Mal1g1538 1 20033233 20035393 ECH
Mal3g4815 3 128164333 128166279 Mal1g1538 1 20033233 20035393 PCT