Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1531 ATGTCTCCTGATATCATAACCTCTGCAACCAACATCACTAACACTCAATCTAAGGCCACAAAACGGGCCTTCGTAACCTTCCTTGCAGGAAACGGTGATTATGTGAAGGGTGTTGTTGGTTTAGCCAAAGGTCTCCGTAAGGTCAAAACCATGTATCCTCTAGTGGTTGCAGTGTTACCTGATGTTCCTCAAGAACATAGGAACATTCTCACCTCACAAGGTTGCATTGTTAGAGAGATTGAACCTGTTTATCCTCCTGAGAACCAAACCCAGTTTGCTATGGCTTATTATGTCATCAACTACTCCAAACTACGTATTTGGGCTTTTGAGGAGTATGACAAGATGATTTACCTTGATGGTGACATACAAGTTTTTGAAAACATTGATCATCTATTTGACTTGCCAAACAACTATTTTTATGCTGTGATGGATTGCTTTTGTGAGGCCTCTTGGCGCCATACCAAGCAGTATGAAATCGGTTACTGTCAGCAGTGCCCTGATAAGGTTGAGTGGCCTACTAATTTTGGGCCCAAACCTCCTCTCTATTTCAATGCTGGCATGTTTGTCTATGAACCTAACATGGCTACTTACCATGATCTCCTTCAAAAACTCCAAGTCACTGAGCCAACTTCCTTTGCTGAGCAGGATTTTTTGAACATGTACTTCAATGACAAGTATAAGCCAATTCCTAATGTTTACAATCTTGTGCTGGCCATGTTATGGCGTCACCCTGAGAATGTTGAACTTGAGAAAGTGAAAGTTGTTCATTATTGTGCAGCTGGGTCTAAGCCTTGGAGGTACACAGGGGAGGAACAAAATATGGAGAGGGAAGACATAAAAATGTTGGTGAAGAAGTGGTGGGAGGTGTATGAAGATGAGAGTTTGGATTACAAGCAACCTGTTAATGCGAATCGCTTAGCATCAGCAATTTTGGAAGCTTCTGATCTAAAGGTTGTCCCTGCTCCATCTGCCGCTTAA 978 0.4223 MSPDIITSATNITNTQSKATKRAFVTFLAGNGDYVKGVVGLAKGLRKVKTMYPLVVAVLPDVPQEHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWAFEEYDKMIYLDGDIQVFENIDHLFDLPNNYFYAVMDCFCEASWRHTKQYEIGYCQQCPDKVEWPTNFGPKPPLYFNAGMFVYEPNMATYHDLLQKLQVTEPTSFAEQDFLNMYFNDKYKPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEQNMEREDIKMLVKKWWEVYEDESLDYKQPVNANRLASAILEASDLKVVPAPSAA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1531 325 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 312 - -
Mal1g1531 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 298 IPR029044 -
Mal1g1531 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 25 298 IPR029044 -
Mal1g1531 325 PANTHER GALACTINOL SYNTHASE 2 1 312 IPR030515 GO:0006012|GO:0047216
Mal1g1531 325 Pfam Glycosyl transferase family 8 26 268 IPR002495 GO:0016757
Mal1g1531 325 CDD GT8_Glycogenin 22 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1531 Mal-Chr1 19916167 19917771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1531 1 325 Glycosyltransferase AT1G56600 71.642 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1531 K18819 - gmx:548050 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1531 1 19916167 19917771 Mal1g1533 1 19957478 19959082 ECH
Mal1g1531 1 19916167 19917771 Mal1g1531 1 19916167 19917771 ECH