Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1283 ATGTATTCTGAAGCTCGTGCAGATGTTCCTCCATATGGCATTGACTTCCCTACACACGAACCTACTGGACGTTTTTCAAATGGCCTAAATATTCCTGACCTAATTAGTGAGAGACTTGGTTTAGAACCATCTCTTCCTTATTTGAGTCCCTTAGTGGTGGGTGAGAAACTTTTACTTGGTGCCAATTTTGCATCTGCAGGTGTTGGGATTCTCAATGATACCGGATTTCAATTTCTACAAATCATCCACATTGGCAAGCAATTGGATCTATTCAATCAATACCAGAAAAAGTTAAGTTCACATATTGGTGCAGAGGGAGCAAAGAAACTAGTCAACAAAGCACTTGTACTCATCATTCTTGGAGGCAACGATTTTGTCAATAATTATTATTTGGTCCCATTTTCAGCAAGATCTCGTCAATTTTCTCTCCCAAACTACGTGACCTATCTCATATCTGAGTACAAAAAAATTCTAAAGAAGCTTTATGATTTGGGAGCTCGTAAGGTTCTTGTAACGGGTACAGGTCCAATTGGGTGTGCCCCTGCAGAGTTAGCTTTTAAAAGTAGAAATGGTGATTGTGATGTGGACCTTATGAAAGCTGCATCCTTATATAATCCACAACTTGTTGAAATGATCAAAGAACTTAACAAAGAGATTGGTGCTAATATCTTCATTGCTGCTAATTCACATCAAATGCACATGGATTTTATTACCAACCCTCAAGCTTTTGGATTTGTTACAGCAAAGGAAGCATGTTGTGGGCAAGGGAGATACAATGGGGTTGGACTATGTACACCCCTTTCAAACTTGTGCCACAATAGAGACCTTTATGCATTTTGGGATGCATTCCATCCATCTGAAAAAGCTAGCAGAATCATAGTTCAACAGATGTTCACTGGATCCAATGTGTATATGCACCCCATGAATCTTAGCACTGTTCTGGCCATGGATTAA 954 0.3941 MYSEARADVPPYGIDFPTHEPTGRFSNGLNIPDLISERLGLEPSLPYLSPLVVGEKLLLGANFASAGVGILNDTGFQFLQIIHIGKQLDLFNQYQKKLSSHIGAEGAKKLVNKALVLIILGGNDFVNNYYLVPFSARSRQFSLPNYVTYLISEYKKILKKLYDLGARKVLVTGTGPIGCAPAELAFKSRNGDCDVDLMKAASLYNPQLVEMIKELNKEIGANIFIAANSHQMHMDFITNPQAFGFVTAKEACCGQGRYNGVGLCTPLSNLCHNRDLYAFWDAFHPSEKASRIIVQQMFTGSNVYMHPMNLSTVLAMD* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1283 317 SUPERFAMILY SGNH hydrolase 111 298 - -
Mal1g1283 317 CDD SGNH_plant_lipase_like 3 301 IPR035669 -
Mal1g1283 317 PANTHER GDSL ESTERASE/LIPASE LTL1 3 315 - -
Mal1g1283 317 Pfam GDSL-like Lipase/Acylhydrolase 19 296 IPR001087 GO:0016788
Mal1g1283 317 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 3 315 - -
Mal1g1283 317 Gene3D SGNH hydrolase 2 302 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1283 Mal-Chr1 16338670 16341612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1283 5 314 Acyl Lipid Metabolism Gene Families AT4G10950 33.866 2.95e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1283 - - gmx:100500155 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1283 1 16338670 16341612 Mal1g1283 1 16338670 16341612 ECH