Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1252 ATGAGTATGACCCAATTCGCCATGGTTGAGGAGTTGGCTTTTCTTGTGAAGGACAATCTTCCTTGCAAGCATCTAGTTCTTACAATGGAAGAACTCTTAGTTAACTTTCTTGAGGCCGAGGACACAAGTTCAGATGGGATCTTGGAATTGGAGCCAATGAACTCTTACAACCGTCTTCTCTTACATCGCCTTGCTGAGATATTTGGGTTTGCGCATGAATCTGTTGGTGAAGGAGAAGATCGCCATTTGATTCTGGAGAGATGTCCAGATACATCTATGCCTCCAATCCTAGTAAGTGATATCCTAGGGACGTATGATGAACCTCAATCTTTGTTTGCATCACACCAAATATTAAGGAGAAAAGAAGCCTCTCCAGTTTCACAGACAAATACAACATCCATTCAGCAGACACTGGAGGAAAGAAAAACGGCTTATTTACTTGCTCGTGAGCGGATTTTTTCTATGAATTTGGAAGATGCAAAAGAGCCTGATGAACAAAAACCACGAAGCGTGCCTGTGGTAGCCCGCCGAATGATTGCACATGCACTAGGTCAAAGAATCAACACAAAGAATCCAAATGAGTTGGTTAGTGATAGTACAAATAATAGAGAGCTCACAGATGAATTAAATGCTCAAGATAAGAATAGTGAAAAATCTGATCTGACAAAAGATTTTGAAGAGTCTGTATCCCTAAGAAGAAACTCAAACAGCAGAACAAGAAACACTAGTAGTTCTAATGCGGCCCCACTGAATAAAAGGAATGATCAAACATCAGTTGACAAAGGTTCGCCACCATTGTCTCAAGATGGAAAACAAGGGCAAAGTGTGAGCAAAGAGTACATGAAAAATGAGCACTTGGGAGCTGCGAAGAGAATGTTTGCTCATGCTTTGGGAGTACACTCGGGGAAGGATGGTTCTGTTCCTAGAAGTAGAAATGGAGAAAAAGGTGCTTCCTGGGTTTCAATCACAATCAAGGAGATGAGTAATGAACATGCTTTTACTCAAAATTGTGATACATTGATTTGA 1026 0.4084 MSMTQFAMVEELAFLVKDNLPCKHLVLTMEELLVNFLEAEDTSSDGILELEPMNSYNRLLLHRLAEIFGFAHESVGEGEDRHLILERCPDTSMPPILVSDILGTYDEPQSLFASHQILRRKEASPVSQTNTTSIQQTLEERKTAYLLARERIFSMNLEDAKEPDEQKPRSVPVVARRMIAHALGQRINTKNPNELVSDSTNNRELTDELNAQDKNSEKSDLTKDFEESVSLRRNSNSRTRNTSSSNAAPLNKRNDQTSVDKGSPPLSQDGKQGQSVSKEYMKNEHLGAAKRMFAHALGVHSGKDGSVPRSRNGEKGASWVSITIKEMSNEHAFTQNCDTLI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1252 341 SUPERFAMILY R3H domain 15 121 IPR036867 GO:0003676
Mal1g1252 341 Gene3D - 2 124 IPR036867 GO:0003676
Mal1g1252 341 MobiDBLite consensus disorder prediction 234 277 - -
Mal1g1252 341 SMART R3H_4 10 88 IPR001374 GO:0003676
Mal1g1252 341 Pfam SUZ domain 116 154 IPR024771 -
Mal1g1252 341 MobiDBLite consensus disorder prediction 207 233 - -
Mal1g1252 341 CDD R3H_encore_like 22 88 - -
Mal1g1252 341 Pfam R3H domain 25 86 IPR001374 GO:0003676
Mal1g1252 341 MobiDBLite consensus disorder prediction 184 277 - -
Mal1g1252 341 ProSiteProfiles R3H domain profile. 23 89 IPR001374 GO:0003676
Mal1g1252 341 MobiDBLite consensus disorder prediction 186 206 - -
Mal1g1252 341 PANTHER RNA-BINDING SUPPRESSOR OF PAS KINASE PROTEIN 1 1 318 - -
Mal1g1252 341 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 1 318 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1252 - - gmx:100801478 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1252 1 15908453 15912135 Mal1g1252 1 15908453 15912135 ECH