Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1162 ATGTTCAACTTCTGCAAAAGATTAGTATGCCTTCTATGTTTTTTCCTCTTGCTATCCTTTGATGTTTCTCTGTGTTTCTCTTCTTCACTTAAGGACTTCACTTTTTGTTTGGATAATCACAAAATAGAAAACTTTACTGTTTTCCCTCACAATGGACATGATCAATCCTCTACTTATGATGACTACTTCAAAATTCTCAATTTTTCAATTCAAAACCTTCGGTTCGCAGAACCTACGATTCCTAAGCCAAGAGCAATTGTACTTCCAGAGAGTTTGGAGCAGCTACAGAAAAGTGTAGCATGCTGCAGAGAATTCTCCTTGAAAATAAGAGTAAGAAGTGGTGGACACAGCTATGAAGGAACTTCCTCTGTTGCTGATGATGGTACTCTTTTTGTCATCATTGATATGATGAATTTAAACAATGTTAGGGTGGATATGGAGACAAAAACAGCATGGGTTGAAGCTGGTGCAACATTGGGAGAAACTTACTATGCTCTCTCTCAGGCTAGTGATGCATATGGATTCTCAGCTGGGTCATGTCCAACTGTAGGAGTTGGCGGACATATCGGTGGTGGTGGGTTTGGTTTATTGTCTAGAAAATATGGACTTGCAGCCGATAATGTGGTCGATGCCCTTCTTGTTGATGCCGATGGACGATTATTAGACCGCGAAACCATGGGAGAAGATGTGTTTTGGGCTATTAGAGGAGGAGGTAGTGGTCTTTGGGGAATTATATATGCATGGAAAATTCAATTGTTAAAAGTGCCACAAATTGTAACTAGTTTTATTGTATCTAGAACAGGCACAAAGAGTCATATTGCTAAGCTAGTGAACAAATGGCAATATGTGGCACCAAATTTGGATGACGAGTTCTATTTGTCATGCTTTGTTGCTGCTGGTTTGTCTGAAGCTAAAAAAATGGGCTTATCAACAACATTTACAGGTTTCTATCTTGGTCACAAATCGAAGGCTATGTCTATCTTGAATCAGAAGTTTCCTGAATTAGGTGTTGTAGAAGAAGAATATATAGAAATGAGTTGGATTGAGTCAGTTCTATTCTTCTCTGGTCTAAATGATGGAGCTTCTGTTTCTGATTTGAGGAATAGGTATATGCAATATAAAGAATATTTCAAGGCAAAATCAGATTTTGTAAGGAGCTATATTCCTCTTGTAGGTATAGAAACTGCACTGAATATCCTAGAAAAAGAGCCTAAAGGGTATGTTATTTTGGATCCTTATGGTGGAGTTATGCATAAGATAAGCAGTGATTCCAATGCTTTTCCCCACAGAAAAGGAAATATTTTTGCAATTCAGTACCAGATCTGTTGGAATGAAGTAGACAAAGAGAAAAGTAGTGAGTATATTGATTGGATAAGAGGGTTCTATTCTTCTATGACTCCTTTTGTTTCATATGGTCCAAGGGCTGCATACATTAATTACATGGATTTTGATCTTGGAGTGATGGAGCTGATTAGTTTTGATGATGATTTGGTAAAAGCAAGGGTTTGGGGTGAAAAGTACTTCTTGAGTAACTATGATAGACTTGTTAGGGCCAAGACTTTGATTGATCCTAACAATGTTTTCACTAATGAACAAGGCATTCTTCCTATGCCATTTGCATTTGCTAGTTCCAATGCCAAAGTACTTATAAATGATTCTTATTTGTAA 1668 0.3741 MFNFCKRLVCLLCFFLLLSFDVSLCFSSSLKDFTFCLDNHKIENFTVFPHNGHDQSSTYDDYFKILNFSIQNLRFAEPTIPKPRAIVLPESLEQLQKSVACCREFSLKIRVRSGGHSYEGTSSVADDGTLFVIIDMMNLNNVRVDMETKTAWVEAGATLGETYYALSQASDAYGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLVDADGRLLDRETMGEDVFWAIRGGGSGLWGIIYAWKIQLLKVPQIVTSFIVSRTGTKSHIAKLVNKWQYVAPNLDDEFYLSCFVAAGLSEAKKMGLSTTFTGFYLGHKSKAMSILNQKFPELGVVEEEYIEMSWIESVLFFSGLNDGASVSDLRNRYMQYKEYFKAKSDFVRSYIPLVGIETALNILEKEPKGYVILDPYGGVMHKISSDSNAFPHRKGNIFAIQYQICWNEVDKEKSSEYIDWIRGFYSSMTPFVSYGPRAAYINYMDFDLGVMELISFDDDLVKARVWGEKYFLSNYDRLVRAKTLIDPNNVFTNEQGILPMPFAFASSNAKVLINDSYL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1162 555 Pfam FAD binding domain 83 221 IPR006094 GO:0050660
Mal1g1162 555 ProSiteProfiles PCMH-type FAD-binding domain profile. 79 255 IPR016166 GO:0071949
Mal1g1162 555 Gene3D - 144 536 IPR016169 -
Mal1g1162 555 PANTHER FAD-BINDING BERBERINE FAMILY PROTEIN 14 539 - -
Mal1g1162 555 Gene3D - 32 139 IPR016167 -
Mal1g1162 555 PANTHER OS08G0158400 PROTEIN 14 539 - -
Mal1g1162 555 SUPERFAMILY FAD-binding/transporter-associated domain-like 75 256 IPR036318 GO:0050660
Mal1g1162 555 Pfam Berberine and berberine like 476 534 IPR012951 GO:0016491|GO:0050660
Mal1g1162 555 Gene3D - 258 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1162 Mal-Chr1 14595000 14596667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1162 26 534 Miscellaneous Gene Families AT1G30760 41.667 9.15e-131 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1162 - - gmx:100790761 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1162 1 14595000 14596667 Mal1g1162 1 14595000 14596667 ECH