LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g0611	ATGGCCATGGTTTTGAAGTCAACAATGGCCGCTTCAGCTCACAATCCAAGCCTTATGAGCCAATCTAGTATATTTGTAAACCCTTCAGTTGATTTGAATCACCGTGTTTCAAATCTTGGATTTAAGGGAAAACAACATGTGATTAAGGTTAGAGCAACAGTGGAAGTGGGTGGTGTGGAGGGTTTGAAAAGAAGAAGCAGTGTTGCATTGGAGGGAACTTTGGGATTGGATATGGTTTCAGAAGGAGAGTTAATGGTGAAGGGTTTTAGAGGGTTGAGGAAGACAAAGCTTGTGTGCACGGTTGGTCCTGCTTGTAGTTCATTGGAGGATCTAGAGAAGTTGGCATTGGGAGGAATGAATGTTGCAAGGCTTAACATGTGTCATGGTACTAGAGAATGGCACCGTGATGTTATTAGGAAGATTAAGAAGCTTAATGAGGAAAAGGGTTTCTCTGTTTCTGTTATGATTGATACTGAAGGTAGTCAGATTCATGTTGTTGATCATGGAGCACCTTCCTCGGTTAAAGTCGAGGAAGATTCAATTTGGTTGTTTACTGCTGAACATTTTGTGGGTTCTCGACCATTCACAGTTCAAGCAAACTATCCAGGTTTTTCTGAAGGTATTGAAGTAGGTGATGAAATTGTTATTGATGGTGGAATGGCATGCTTTGTTGTCATTGAAAAAACTGGAAATGATTTGCGTTGTAAGTGCATAGATGCTGGTCTTTTCTTGCCCAGAGCCAAATGTAGTTTCTGGAGAGACGGAAAGCTTGTAAGGAGGAATTACAAGCTCCCTACTCTATCAACAAAGGATTGGGCTGACATTAACTTTGGTATAGCTGAGGGTGTTGATTTTTTCGCCCTTTCCTTTGTCAATCACGCTGACTCTGTTAAGGATTTAAAGAACTACCTCTCTGACAAATCAACCAAATCCATAAAAGTATTGGCAAAGATTGAAAGCTTAGAATCCCTTCATAATCTGGAGGAAATATTGAAAGCTTCTGATGGAATCATGGTAGCTCGAGGTGACCTTGGAGTCGAAATACCACTTGAACAGATTCCTACAGTTCAGGAGGATATAATTCACATTTGCAGACAACAAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTCGAGTCAATGGTTGAGTATCCAACACCAACTCGTGCCGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAATATGCGGATGCTTTGATGTTATCTGGTGAGTCAGCTATTGGTTCATTTGGACAGAAAGCATTGGCAGTGTTGGATATGACTAGCAGTAGAATGGAATCATGGAGTAGAGAGGAAAACAGACAAAGTCTTCTCAATCACCATAAACTTGGAGCATCATTGCCAGATTGCATCACTGAGCAAATATGCAATTGTGCTGTTGAAATGGCCAACAAACTTGGTGTGGATGCCATCTTTGTTTACACAAAGCATGGATACATGGCATCATTACTCTCGCGCAACCGTCCAGATCCTCCCATCTTTGCTTTCACCGACGATGAGAGTACTCGCATGGCTCTAAATTTGCAATGGGGTGTTGTACCACTTCTAGTTGATTTATCAGATGATGCTGAATCAAACATCTCAAAATCTGTTCAGCTTATGAAATCCAAAGGATTGATCAACAAAGGAGATGTTGTTCTAGTGGTCTCAGATGTTGCTCCAACACGTTCAACTCCTATGGCTCTCCAATCAATTCAGGTTAAGACCATTATCTAG	1737	0.4139	MAMVLKSTMAASAHNPSLMSQSSIFVNPSVDLNHRVSNLGFKGKQHVIKVRATVEVGGVEGLKRRSSVALEGTLGLDMVSEGELMVKGFRGLRKTKLVCTVGPACSSLEDLEKLALGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSVMIDTEGSQIHVVDHGAPSSVKVEEDSIWLFTAEHFVGSRPFTVQANYPGFSEGIEVGDEIVIDGGMACFVVIEKTGNDLRCKCIDAGLFLPRAKCSFWRDGKLVRRNYKLPTLSTKDWADINFGIAEGVDFFALSFVNHADSVKDLKNYLSDKSTKSIKVLAKIESLESLHNLEEILKASDGIMVARGDLGVEIPLEQIPTVQEDIIHICRQQNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSFGQKALAVLDMTSSRMESWSREENRQSLLNHHKLGASLPDCITEQICNCAVEMANKLGVDAIFVYTKHGYMASLLSRNRPDPPIFAFTDDESTRMALNLQWGVVPLLVDLSDDAESNISKSVQLMKSKGLINKGDVVLVVSDVAPTRSTPMALQSIQVKTII*	579

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g0611	578	PANTHER	PYRUVATE KINASE	36	577	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	SUPERFAMILY	Phosphoenolpyruvate/pyruvate domain	86	436	IPR015813	GO:0003824
	Mal1g0611	578	Pfam	Pyruvate kinase, barrel domain	93	434	IPR015793	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	TIGRFAM	pyruv_kin: pyruvate kinase	93	564	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	ProSitePatterns	Pyruvate kinase active site signature.	312	324	IPR018209	GO:0004743\|GO:0006096
	Mal1g0611	578	Pfam	Pyruvate kinase, alpha/beta domain	460	559	IPR015795	-
	Mal1g0611	578	SUPERFAMILY	PK beta-barrel domain-like	163	249	IPR011037	-
	Mal1g0611	578	SUPERFAMILY	PK C-terminal domain-like	454	561	IPR036918	-
	Mal1g0611	578	PRINTS	Pyruvate kinase family signature	314	340	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	PRINTS	Pyruvate kinase family signature	391	409	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	PRINTS	Pyruvate kinase family signature	341	365	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	PRINTS	Pyruvate kinase family signature	366	390	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	PRINTS	Pyruvate kinase family signature	410	426	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	PRINTS	Pyruvate kinase family signature	150	166	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	PRINTS	Pyruvate kinase family signature	283	297	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Mal1g0611	578	Gene3D	-	95	425	IPR040442	-
	Mal1g0611	578	PANTHER	PYRUVATE KINASE	36	577	-	-
	Mal1g0611	578	Gene3D	-	162	264	IPR015806	GO:0004743\|GO:0006096
	Mal1g0611	578	Gene3D	-	426	571	IPR036918	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g0611	Mal-Chr1	7042856	7046614	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g0611	K00873		-	gmx:100780644	924.08

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g0611	1	7042856	7046614	Mal1g0611	1	7042856	7046614	ECH
	Mal6g1473	6	27203742	27210550	Mal1g0611	1	7042856	7046614	PCT