Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0603 ATGAAACTGAGACTCAGATCATTAGAATCCAAAGAAACCCTAAAAATAGAAGTTCCTGATCCATGTTCCTTTCAACAACTCAAATTCACAATTTCTCAAACAATCCCTTCTCCTTCATCTCCTTCCTCTTCCTCTTCTCTTCATCTTTCCCTCAACAGAAAAGACGAAATCAACGCCTCTTCCCCAAATGATTCCATCCACTCAATCGGCATCGCCGCCGGCGACCTCATCTACTACTCTTTCAACCCTAACGCCTTCTCCGGCGACGAAAACCTCCCTCACAAACCCATCAACCGACCCATCATTCAAAACTCGCCGGAAATCATGCCAATTGACGAAAAGTCTCCGACTTTGAACACCCCGGAAGCGTGTGACACTGAAATGGTTGATGGGTCAGATGAAGCAGCGGTGATGGCGGTGAAGAATAATTCAGAACCTGATTTCGTGAAAAGGGTTCTTAAAGAAGCGCTTGGTGATGATGTTAATGATTTGAAGCTTTTGGTATTTGCGGTTCATGCTGTTATTCTTGAATCTGGGTTTGTTCGTGTTGATCAAGTTTCGGGTATGGCGATTAGTTGCTCTCATCTTTTTGGTGATATGTCTTCATCTTCTTCAATGATATCTTTGAGGTACACTCTTCCTGAGATTCTTACTAATGGTTCATCTTATGCTGTGAATTTGAAAATTCAGACTTTAGGGAATTTTGTGAATGTTTATGGTTCATTATGTGATGATGCTGGGTCAAGGGTGCATAGTCTTTATTTAGATAAATGTAGATTTGCTAAGCCTTTAGAGTTGATGTTGGCAAATACTGAATCTAATGGTGGTGTTGATGTTAATGTTAATGATGGTGGAAATGAGGTTTTTGAATTGTGGAAGATAGTGAAAGATAGGCTTGCATTGCCACTTTTAATTGATCTTTGTGATAAAGCTGGATTAGAACTTCCACCGTGTTTTATGCGTCTTCCGATGGAACTTAAGCAGTTAATATTTGAGTATCTTCCTGGTGATGATTTGGCTAAAGTGTGTTGCACATGTTCTGAATTGCAATACATTGCCTCGAATGATGAGTTGTGGAAGAAGAAGTTTGAGGAGGAGTTTGGACAAAGGGTGAATGGTATGAAGTTTTTCAAGAACTTGTTTGCTCATTACCGGGCAACGAAGAAGAAAGCAGAGCAACCGCCTCTTTTCCAAAATCCTCGTCGGTATGGTATCATGAGATACTTTCAAAGAAGAAGAGGTCCTAATCCTTTTGGAATGCCTCCAATTTTGGGTGGAGAATATGATCTGCAGCCAAATTTTGGTGTAAATCTCCCTGCATACGCACCAAGGCGTACTTTCATTCCCCCATGTCGTCTGGGAGATTTTCTATGA 1374 0.4098 MKLRLRSLESKETLKIEVPDPCSFQQLKFTISQTIPSPSSPSSSSSLHLSLNRKDEINASSPNDSIHSIGIAAGDLIYYSFNPNAFSGDENLPHKPINRPIIQNSPEIMPIDEKSPTLNTPEACDTEMVDGSDEAAVMAVKNNSEPDFVKRVLKEALGDDVNDLKLLVFAVHAVILESGFVRVDQVSGMAISCSHLFGDMSSSSSMISLRYTLPEILTNGSSYAVNLKIQTLGNFVNVYGSLCDDAGSRVHSLYLDKCRFAKPLELMLANTESNGGVDVNVNDGGNEVFELWKIVKDRLALPLLIDLCDKAGLELPPCFMRLPMELKQLIFEYLPGDDLAKVCCTCSELQYIASNDELWKKKFEEEFGQRVNGMKFFKNLFAHYRATKKKAEQPPLFQNPRRYGIMRYFQRRRGPNPFGMPPILGGEYDLQPNFGVNLPAYAPRRTFIPPCRLGDFL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0603 457 PANTHER F-BOX PROTEIN SKIP22 1 455 - -
Mal1g0603 457 SMART fbox_2 322 362 IPR001810 GO:0005515
Mal1g0603 457 Gene3D - 320 393 - -
Mal1g0603 457 Gene3D - 144 319 - -
Mal1g0603 457 Pfam F-box-like 321 361 IPR001810 GO:0005515
Mal1g0603 457 PANTHER F-BOX PROTEIN SKIP22 1 455 - -
Mal1g0603 457 SUPERFAMILY F-box domain 316 375 IPR036047 GO:0005515
Mal1g0603 457 ProSiteProfiles F-box domain profile. 316 362 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0603 Mal-Chr1 6967355 6968728 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0603 K10293 - gmx:100796338 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0603 1 6967355 6968728 Mal1g0603 1 6967355 6968728 ECH