Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0574 ATGTCTTCTTCGCTCTCACCATTACTCTCTTCACCATTCATCCACGATTCTTCAACTACTCGCCATGGAACTAAGCTTCTTCCTTTTCCTCACGCCACTGCCACACGCAAACCGCGATGCTTCAAATCTTTTTCTTTCAACTGCTCCCTCGACCGCATCCCCAAGCAGTTCAGACAGGAAAATCTCAAGGATGGGTTGATGGACAACTACAAGAATGCACCCCAGTGTCTATATGGTCTTAATCCCTCACAAATGGACATATTCATAAATGCAGACAATCCTATACACCAGATGTCTGAAAGAGTTACAGAGGAAAGCATTTCGTCGGCCAAAAGTTATTTGGCTCATAGTGGGATGGGTAGTGTGTCAGGCATGGATACTAATGCCTCTTCAAGACACAGCATGAGTGTTAGTATGTATCGAGGAGGTAGGGGAACGGGAAGACCTAGAAAATCTCCACCGGATTTGCCTTCTTTTCTCTTGGATGCTCGAATATGTTATCTTGGTATGCCGATTGTACCAGCTGTGACAGAACTTATTCTGGGTCAACTTATGTGGTTGGATTATGATAATCCTGCCAAACCTGTTTATTTATATATTAATTCGTCTGGGACTCAAAATGAGAAAAATGAGACTGTGGGATCAGAAACCGACGCTTATTCCATAGCTGATATGCTTGCTTATATCAAATCTGATGTCTATACTGTGAATTTGGCCAAGGCATTTGGCCAAGCAGCAATGCTTCTGTCTGTTGGGAAAAAGGGTTATCGTGCTGTACTTACAAATTCATCGACAAAAGTATTTCTCCCGAAAGTCTACAGATCAAGTGGTTCTGTTGCAGATATGTGGATTAAGGCAAAAGAGCTGGAGGCTAATTCTGAGTATTACATTGAGCTGTTGGCAAAAGGAACAGGGAAGTCAAAGGAAGAAATTGCTAAAGACGTCCAGAGGACTAGATATTTCCAAGCACATGACGCCATAGAATATGGACTCGCTGACAAAATAATGGATCCAGGGGAAGCTGCATATGAGAAGCGGAATTATAATGAAATGCGTGCTACAAGAGCACTGCCGAGAGGTGGCGGGAACCCTCAAGCAGCTCCTTCAGGACTTTAG 1116 0.4346 MSSSLSPLLSSPFIHDSSTTRHGTKLLPFPHATATRKPRCFKSFSFNCSLDRIPKQFRQENLKDGLMDNYKNAPQCLYGLNPSQMDIFINADNPIHQMSERVTEESISSAKSYLAHSGMGSVSGMDTNASSRHSMSVSMYRGGRGTGRPRKSPPDLPSFLLDARICYLGMPIVPAVTELILGQLMWLDYDNPAKPVYLYINSSGTQNEKNETVGSETDAYSIADMLAYIKSDVYTVNLAKAFGQAAMLLSVGKKGYRAVLTNSSTKVFLPKVYRSSGSVADMWIKAKELEANSEYYIELLAKGTGKSKEEIAKDVQRTRYFQAHDAIEYGLADKIMDPGEAAYEKRNYNEMRATRALPRGGGNPQAAPSGL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0574 371 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC 42 356 - -
Mal1g0574 371 Pfam Clp protease 157 337 IPR023562 -
Mal1g0574 371 Gene3D - 129 341 - -
Mal1g0574 371 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 42 356 IPR023562 -
Mal1g0574 371 PRINTS Clp protease catalytic subunit P signature 195 215 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal1g0574 371 PRINTS Clp protease catalytic subunit P signature 155 170 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal1g0574 371 PRINTS Clp protease catalytic subunit P signature 314 333 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal1g0574 371 PRINTS Clp protease catalytic subunit P signature 235 252 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mal1g0574 371 SUPERFAMILY ClpP/crotonase 150 341 IPR029045 -
Mal1g0574 371 CDD S14_ClpP_2 155 335 IPR001907 GO:0004176|GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0574 Mal-Chr1 6587104 6592320 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0574 K01358 - gmx:100820008 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0574 1 6587104 6592320 Mal1g0574 1 6587104 6592320 ECH