Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0567 ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACTTTTCAGACTGATGGGAACAACAATGTTAGGTATGTTGCAAGTGAGTTGGTATCGGATATTATTGTTGGAATAGGGGATACAAAGTTTTACTTACACAAGTTTCCTCTCATATCAAAGAGCTCTCACTTACAGAAGTTGATCTCCCTCAATAATGAAGAAAACATCGATGAAATTCAAATTTCAGACATTCCTGGTGGTGCAAGTGCCTTTGAGACATGTGCTAAGTTTTGCTACGGCATGACTGTTACCCTCAATGCTTACAATGTGATTGCTACTAGATGTGCAGCAGAGTATCTTGGAATGCACGAAAACATTGAGAAAGGAAACCTTCTTTTCAAGATTGATGTATTCCTTAGCTCTAGCATCTTTCGTAGTTGGAAGGATTCCATTATCCTTCTTCAGACTACAAAGTCTATGTTACCAATGGATGAGGAGCAAAAGGTTGTCATTCGTTGCATTGAATCTATAGCAAATAAGGCATGCGTTGATGTGTCTAAAGTTGACTGGTCTTACACGTATAACCGAAAAAAGCTTCCGGAAGAAAACGGCTTTGAGTCGAACCAGAATGGAGTTAGAACTCGAAATGTGCCAAAAGACTGGTGGGTTGAAGATTTATGTGAGCTTGAAGTTGACATGTACAAATCTGTTATAGCAAATATCAAAACCAAGGAAATTCAATCTAATGATGTTATTGGTGAAGCCTTGAAAGCTTATGCTTACAGAAAGTTGCCAAATTTCAGCAAGGGTATGATCCCATGTGAGGATGTGTCGAAGCATCGGTTGATAGTTGAAACTATTGTGAAGTTGTTGCCTTCCGAGAAAGGCAGTGTGTCATGTAGGTTCTTAGTGAAGTTATTGAAAGCTGCCATTTTTGTAAAATCAGAAGATAGGATCAAAGATGAGCTAGTAAAGAGAATCGGTCAGCAACTAGAGGAGGCTTCCGTAAACGATATTTTGATTCGAGCACCAGATAGAGAGACTACAATGTATGATGTCGGCATAGTACAGAAAATTGTAAGGGAATTTCTTATGAAAGATCACAATTCCGAGATTGAATTGGTTGGAGGTGGTGAACTTGAAGGGATAAGAAAGCCAGGGATTTTATCAGATGCTTCTAAGCTGATGGTTGCAAAACTCATAGATGGATACCTTGCTGAAATCGCAAAGGATCCTAATTTACCATTGTCGGATTTTGTTAATCTTGCTGAGTTAGTTTCTAGCATCTCTCGTCCGGCCCATGATGGACTTTACAGGGCTATTGACACATATTTGAAGGAGCACCCTGGTATCAGCAAAGGCGAAAAGAAGAGTATATGCAAGCTAATGGATTGCAGAAAGCTATCAGTTGATGCATCCATGCATGCAGTGCAAAACGAGAGGCTACCGACACGTGTAATTGTGCAGGTACTACATTTCGAGCAGATCAGAACTGCCGCATCATCGGGTACTAGCACTCCAGACATAGCTAAAGGAATCAAAGACTTGAGCATTGGATCCAACGGTAGCTCAAGGTCAGGAACAACTAATCCAGAAGATGATGCTGCGACAGCCGAGGAGTTAAAGGCGTTGAGAAAGGAACTTGCGTCGTTGAGACTAAGCAATGGAGTTGGAAACAGTTACAAAGATGGAGATGCTAAACCAAACATGGATAAGGCTGTTATTGGAAAGATGAAAGGGTTGTTGAAGTCAAAGAAGTCTTTCATTAAGCTATGGGCAAGCAAAGGAGGACATGGTGAAAATAGTGGTTCAGATTCATCTGAGAGTATTGGTTCTGTTAACCCTGAAGAAGTTAAATCTACACCATCGAGAAATAGGAGGAACTCAGTTTCCTAA 1869 0.404 MKFMKLGSKPDTFQTDGNNNVRYVASELVSDIIVGIGDTKFYLHKFPLISKSSHLQKLISLNNEENIDEIQISDIPGGASAFETCAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSMLPMDEEQKVVIRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVIANIKTKEIQSNDVIGEALKAYAYRKLPNFSKGMIPCEDVSKHRLIVETIVKLLPSEKGSVSCRFLVKLLKAAIFVKSEDRIKDELVKRIGQQLEEASVNDILIRAPDRETTMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLSDFVNLAELVSSISRPAHDGLYRAIDTYLKEHPGISKGEKKSICKLMDCRKLSVDASMHAVQNERLPTRVIVQVLHFEQIRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEDDAATAEELKALRKELASLRLSNGVGNSYKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRRNSVS* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0567 622 Pfam BTB/POZ domain 27 117 IPR000210 GO:0005515
Mal1g0567 622 MobiDBLite consensus disorder prediction 585 622 - -
Mal1g0567 622 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 619 IPR029960 GO:0009958
Mal1g0567 622 MobiDBLite consensus disorder prediction 508 524 - -
Mal1g0567 622 Gene3D Potassium Channel Kv1.1; Chain A 15 121 IPR011333 -
Mal1g0567 622 Pfam NPH3 family 211 464 IPR027356 -
Mal1g0567 622 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Mal1g0567 622 MobiDBLite consensus disorder prediction 590 622 - -
Mal1g0567 622 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Mal1g0567 622 MobiDBLite consensus disorder prediction 493 526 - -
Mal1g0567 622 PANTHER OS12G0117600 PROTEIN 1 619 IPR043454 -
Mal1g0567 622 SUPERFAMILY POZ domain 22 116 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0567 Mal-Chr1 6452205 6456242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0567 8 494 EF-hand Containing Proteins AT3G44820 34.489 1.65e-96 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0567 - - gmx:100807318 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0567 1 6452205 6456242 Mal1g0567 1 6452205 6456242 ECH