Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0546 ATGGTTATCGATATCATAACCTTAGAAAACAGGTATATTGATTCTTGCAGTAGACATGGTGTTTTGCCTCATGCTGCTATTATGTCAAGCTTTTTCAAGGCTGAGGTAAAAAAATCCCACCAAGAGCCAATCGTCCTGGACATTTTAATTGACGACCTTAAGGATATTGATTTTCCTCCACTCTTCGAGATATGCACGAGCCTTGATACTACTGAAATAGAAGCTGTTGATGTACACAATGAAGCTCCATGTGTATTAAGTGGAGAGTATGTATTACCGTTGATGCGTGCTGTTAAGCAAAAGCTTCGAGTAGTTCAACTACAGGATGTGTCATTTGCAAAAGACTTCATACGGGATATCTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTCTTGGCGTTTCCGGAAGTTGAGCTTGATGGGGGAGTTCATGCATATGCACACACTTAATCTTGATTTCAGTGCTTCCCTTACCAGTTTCGAAGAAGACTGTTTTAATTGCATGCCCAATCTAATGTGTCTCTCAATGTGTGAAACAAGGATCTCAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAGTATTGTAATGATGCGGGAACATCTTTTGCCACATCCAGTGGGAAGTCAGATGCCTCTGCTGATTTTAGTCAGCTTGATAGAGTTCCTTTTATTGGTGAATCCCGCATCGATACAAGGGAACTAACAGATCTTAACATCAGTGTCGAGGATCCACTTAGAAATTTTTATGCCTTTGATGAAGTTATGAGTCATGATGTTCAAAGCACTGTTGAGGAATCATCAGATGATAGTGAAATTGATTTGACAAATCATCATCATAGAAACTGGTTGTCAGATGTTTTTCCTAGGTGGGGTTTACAATTGCCTCTTCAGAGCGAGAATGAAGTAGAGTCATCAAGAGGTTCCTTTACAGGGAATGGTGTTGATGTTTCTATGAAGTACATGTCTTGTCATGCATCACCAATATGTCGGCAAAAACATTACAGAGAATTCATGATAGCTTCATTACCGAATCTGAAAAGTTTAGATAATATGCCTATCAGAAATATTGACAAGGAAAGGACTACTGGAATATTTTCTCAATACTTTGAATATCTTCCATACAGATGGAAGAGCAAAGAGAGTGTTTTAAGTATCTTACACAAGCGAGAAATAAAATCAGGCCGCATTAAGGTGCAATCTTCTAAGCATAGCCCATCACATCCTTCTGGAACGTCTCAACATTTTTATACTAGGTCTCTTTCTGCTGCTAAACTGGGATCTTCAACATGGCCTTTGTTACATCCCCTTTCTGTATCAGGATTTGAATTGGATAAGGGCTTTCGTCCAAGGCAGTTTGAGTATCACCCATCTGACTCCAGCTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATTAATCATGAGAGTGAACGCATTGTGAGTTATATCCCATCACTTGGCGCAATGAATAGTGTCTTGGGTCTTTGTTGGCTCAAGAAATATCCTTCTAAGCTTATAGCAGGTTCAGATAATGGCTCCCTGAAATTGTATGACATCAACCATATACCAAGAAAAATTACTGGCTTATATGGGAACTCTGGTTGTGTTACCTTCGACGAATTTGACCAGTTGACATCTGTCCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAAAAATGTTGCTTTGTATGACGTCAACAGTGGAAAGCGCTTACAAGTTTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAGTTTGCAAATCATTCCCCGTCAATTTTTGCTACTTCATCATTTGATCAGGATGTCAAGATGTGGGACTTGAGACAGAAACCAATACAGCCTTGCTTCACTGCTTCAAGCTCTAGGGGAAATGTGATGGTCTGTTTTTCTCCAGATGACCAATATATTCTAGCATCAGCAGTAGATAATGAGGTTAGACAATTTCTGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCAACTGAAAGTTCTCAAAATTACACTCGTTCTTATTACATGAATGGGAGGGACTACATTATAAGTGGAAGTTGTGATGAACACATTGTCCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATGTTTCCCTGGAGGGTAAAAGCTTAGGAAGTTCCATGTTTGTTCAATCTTTGAGAGGCGATCCTTTCAGGGATTTCAATATGAGTGTGTTAGCAGCCTACATGCGGCCTGGCTCCACGTCTGAAATTGTCAAGGTAAACTTACTAGCATCTAGTGGCCATGCTAAGGACGACTCCGACGACCATCCTGCATGCCCATCCCACATCATGGGAGCATGA 2406 0.404 MVIDIITLENRYIDSCSRHGVLPHAAIMSSFFKAEVKKSHQEPIVLDILIDDLKDIDFPPLFEICTSLDTTEIEAVDVHNEAPCVLSGEYVLPLMRAVKQKLRVVQLQDVSFAKDFIRDISQRGLACQVLTLRSWRFRKLSLMGEFMHMHTLNLDFSASLTSFEEDCFNCMPNLMCLSMCETRISNLWTTVAALSKLPSLVELRFQYWQYCNDAGTSFATSSGKSDASADFSQLDRVPFIGESRIDTRELTDLNISVEDPLRNFYAFDEVMSHDVQSTVEESSDDSEIDLTNHHHRNWLSDVFPRWGLQLPLQSENEVESSRGSFTGNGVDVSMKYMSCHASPICRQKHYREFMIASLPNLKSLDNMPIRNIDKERTTGIFSQYFEYLPYRWKSKESVLSILHKREIKSGRIKVQSSKHSPSHPSGTSQHFYTRSLSAAKLGSSTWPLLHPLSVSGFELDKGFRPRQFEYHPSDSSLMVFGTLDGEVVVINHESERIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDINHIPRKITGLYGNSGCVTFDEFDQLTSVHVNSTDELFLASGYSKNVALYDVNSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIQPCFTASSSRGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHIVRICCAQTGRRLRDVSLEGKSLGSSMFVQSLRGDPFRDFNMSVLAAYMRPGSTSEIVKVNLLASSGHAKDDSDDHPACPSHIMGA* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0546 801 Gene3D Ribonuclease Inhibitor 92 240 IPR032675 -
Mal1g0546 801 SMART WD40_4 636 674 IPR001680 GO:0005515
Mal1g0546 801 SMART WD40_4 590 631 IPR001680 GO:0005515
Mal1g0546 801 SMART WD40_4 549 587 IPR001680 GO:0005515
Mal1g0546 801 SMART WD40_4 494 536 IPR001680 GO:0005515
Mal1g0546 801 SMART LRRcap_2 347 365 IPR003603 -
Mal1g0546 801 PANTHER BNAC09G30780D PROTEIN 1 787 IPR046377 GO:0071493|GO:0080008
Mal1g0546 801 ProSiteProfiles Trp-Asp (WD) repeats profile. 598 633 IPR001680 GO:0005515
Mal1g0546 801 SUPERFAMILY WD40 repeat-like 464 731 IPR036322 GO:0005515
Mal1g0546 801 SUPERFAMILY RNI-like 90 364 - -
Mal1g0546 801 Gene3D - 462 749 IPR015943 GO:0005515
Mal1g0546 801 MobiDBLite consensus disorder prediction 782 801 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0546 517 680 Miscellaneous Gene Families AT5G08390 26.829 4.32e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0546 - - gmx:100806443 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0546 1 6246783 6254906 Mal1g0546 1 6246783 6254906 ECH