Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0489 ATGCCAAACCTCTTATTTCTTTGCCTAACTATCACCATTTATCTTTCCACTTTCCACACCAATTATTTCCTTGTACAATCCCTCACTTCACCCTCAGACATTGAAGCTCTCAAAGCCTTCAAAGCCTCAATCAAACCCTCTTCCATAACACCATGGTCATGTTTAGCATCATGGAACTTCACCATTGATCCATGTTCACTCCCTCGTCGCACTTACTTCATCTGCGGATTCACCTGCACCTCTGATTCCACACACATCAACCAAATCACCCTCGACCCTGCAAGCTACTCAGGCTCACTCACACCACTCATCTCTCAACTCACCCAACTCATCACACTAGACCTCTCTGACAACAACTTCTTTGGCTCAATTCCATCTTCAATCTCTTCCCTTTCCAACCTCAAAACCTTAACCCTCCGATCCAATTCCTTCTCTGGTCCAATCCCTCCTTCCATAACTACACTCAAATCACTCGAATCTCTTGATCTTTCACACAATTCTCTATCCGCGTCACTCCCAAACTCATTGAATTCTCTCACAAACCTTCGTAGAATCGATTTGAGTTTCAATAAACTAACCGGTTCGATCCCGAAACTACCACCCAATTTGCTAGAACTCGCAATCAAGGCAAATTCTTTATCCGGGCCTCTTCAAAAAACAACCTTTGAAGGATCTAACCAATTAGAAGTGGTTGAACTAAGTGAAAACACACTCTCCGGAACAATTGAATCATGGTTCTTGCTTTTGCCATCACTACAACAAGTGAATTTGGCAAACAACAGTTTCACGGGAATTCAGATCTCAAAACCAGCACGTGGTGTGGAAAGCAATCTCGTGGCATTGAACCTAGGATTTAACAAAATCCAAGGTTACGCGCCCGCGAATCTCGCTGCGTATCCGATGTTGTCGTTTTTGTCTATTCGTCATAACTCGTTACGTGGCAATATACCATTGGAGTACGGGCAGATCAAGTCTATGAAGAAGTTGTTCTTGGATGGGAACTTCTTTGCCGGGAAGCCGCCGGCGGCATTGTTGGCTGCCGGAGCTACGGTTTCCGGTAGCTTGGGAGATAATTGCCTACAGGTATGTCCAGTTTCTTCACAGATGTGTGCGCCGGCACAGAAACCCAGCTCCGTTTGCAAACGAGGTTACCGTGGAAGATCATAG 1167 0.4516 MPNLLFLCLTITIYLSTFHTNYFLVQSLTSPSDIEALKAFKASIKPSSITPWSCLASWNFTIDPCSLPRRTYFICGFTCTSDSTHINQITLDPASYSGSLTPLISQLTQLITLDLSDNNFFGSIPSSISSLSNLKTLTLRSNSFSGPIPPSITTLKSLESLDLSHNSLSASLPNSLNSLTNLRRIDLSFNKLTGSIPKLPPNLLELAIKANSLSGPLQKTTFEGSNQLEVVELSENTLSGTIESWFLLLPSLQQVNLANNSFTGIQISKPARGVESNLVALNLGFNKIQGYAPANLAAYPMLSFLSIRHNSLRGNIPLEYGQIKSMKKLFLDGNFFAGKPPAALLAAGATVSGSLGDNCLQVCPVSSQMCAPAQKPSSVCKRGYRGRS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0489 388 Pfam Leucine rich repeat 201 261 IPR001611 GO:0005515
Mal1g0489 388 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Mal1g0489 388 ProSiteProfiles Leucine-rich repeat profile. 181 203 IPR001611 GO:0005515
Mal1g0489 388 ProSiteProfiles Leucine-rich repeat profile. 157 179 IPR001611 GO:0005515
Mal1g0489 388 SUPERFAMILY L domain-like 30 341 - -
Mal1g0489 388 Gene3D Ribonuclease Inhibitor 31 199 IPR032675 -
Mal1g0489 388 Pfam Leucine Rich Repeat 110 131 IPR001611 GO:0005515
Mal1g0489 388 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 22 387 - -
Mal1g0489 388 Gene3D Ribonuclease Inhibitor 200 364 IPR032675 -
Mal1g0489 388 PRINTS Leucine-rich repeat signature 158 171 - -
Mal1g0489 388 PRINTS Leucine-rich repeat signature 179 192 - -
Mal1g0489 388 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 22 387 - -
Mal1g0489 388 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Mal1g0489 388 SMART LRR_typ_2 155 178 IPR003591 -
Mal1g0489 388 SMART LRR_typ_2 107 131 IPR003591 -
Mal1g0489 388 SMART LRR_typ_2 179 206 IPR003591 -
Mal1g0489 388 SMART LRR_typ_2 249 270 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0489 Mal-Chr1 5667484 5668650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0489 35 384 Receptor kinase-like Gene Family AT3G05360 30.270 1.10e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0489 - - lja:Lj5g3v2113590.1 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0489 1 5667484 5668650 Mal1g0489 1 5667484 5668650 ECH