Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0197 ATGACGCTGAGATTTCAACTCCAAATTCAACAATGTCCTCTTCCTCCTCCTCAACTTCATCTTAGAAAAAATAACAGCATTCGTTGTATTTTAACGAAACAAGGACAACGATTTCTCACAAAGCTATCCACCACTACCAGTACCGAAAATCTGATTCGTAAATTCGTACAATCCTCACCCAAATCTGTTCTCCTCTCCACTCTCACTCACCTCACCTCTCCCACCACCACCCACCACAACAACCACCTCTCTTCTCTCGCCCTCCCTCTCTACACAAGAATCAGCGAAGCACCATGGTACACGTGGAACCCAACCATCATCGCCGACTTAATCACCCTCCTCCACAAACTCCAGTGCTACACCGAAGCCCAAACCCTAATTTACGAAACCACTTCAAAACTCAACAACAAAGAACGTGACATTGTTCTCTTCTACTCTAAACTCTTGGACTCACATTCCAAACGCGCTTCTCAAACCGGTTTTGATGCAGCTTATTCTTACCTCAACCACCTTCTTCACACTTCCTCTTCAATTTACGTCAAACGTAGAGCTTATGAATCCATGGTTAGTGGATTGTGTGCAATGGATAAGCCTTGTGAAGCTGAGAATCTGGTTCAGGAATTTAAACAAACAGTTGGTGGTCATAAGATTCAACTTCAACCTTCTGGTTTTGAATTCAAGTCTATTTTGTATGGATATGGAAGATTGGGTTTGTTTCATGATTTGCTAAGAGTTGTTGATGAAATGGAGAAAAATGGGTTTGTTATTGATACTGTTTGTTACAATATGGTTCTTTCAAGTTTTGGAATTCATGGGGAGTATGTGGAAATGGTTTCTTGGCTTACAAGGATGAGGAATTCCGGTGTTCCGTTTTCTATTAGGACTTATAATTCGGTTTCCAATTCTTGTCCGACAGTTATGAGGAAGGTTGTGGACTTGAATGACCTGGCATTGTCGGTTGAAGAGTTGTTGGGCGCGTGTTTGGAAGGAGGGGAAGCTATGGTGGTTAAGGAGCTGCTTTCGTGTAATGTGATTTTGGATGAGGTGATGGTGTGGGATTCTCAAGAGGTGAAGTTGGATTTGCATGGATTTCACTTGGGTTCGGCTTATTTGGTTATGCTGCTTTGGTTGGAGGAGATGCTTAAGAGGTTGTTGAATGCATCGAGTTATGAGATTCCTGCTGAAATCACTGTGGTTTGTGGGGTAGGAAAGCATAGCAATGTGAGAGGAGAATCGCCGGTTAAAGTATTGGTTAAAGAGATGATAATGAAGATGAAAGGTCCACTCAGGATTGATAGAAAGAACAATGGCTGCTTTGTTGCTAAAGGTAAAGCTCTGAAAATTTGGCTGTGTGAATTGAGGAATCCATGA 1371 0.4216 MTLRFQLQIQQCPLPPPQLHLRKNNSIRCILTKQGQRFLTKLSTTTSTENLIRKFVQSSPKSVLLSTLTHLTSPTTTHHNNHLSSLALPLYTRISEAPWYTWNPTIIADLITLLHKLQCYTEAQTLIYETTSKLNNKERDIVLFYSKLLDSHSKRASQTGFDAAYSYLNHLLHTSSSIYVKRRAYESMVSGLCAMDKPCEAENLVQEFKQTVGGHKIQLQPSGFEFKSILYGYGRLGLFHDLLRVVDEMEKNGFVIDTVCYNMVLSSFGIHGEYVEMVSWLTRMRNSGVPFSIRTYNSVSNSCPTVMRKVVDLNDLALSVEELLGACLEGGEAMVVKELLSCNVILDEVMVWDSQEVKLDLHGFHLGSAYLVMLLWLEEMLKRLLNASSYEIPAEITVVCGVGKHSNVRGESPVKVLVKEMIMKMKGPLRIDRKNNGCFVAKGKALKIWLCELRNP* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0197 456 SUPERFAMILY SMR domain-like 357 442 IPR036063 -
Mal1g0197 456 Pfam Pentatricopeptide repeat domain 244 299 IPR002885 -
Mal1g0197 456 PANTHER ATPASE EXPRESSION PROTEIN 3 21 452 - -
Mal1g0197 456 ProSiteProfiles Smr domain profile. 359 444 IPR002625 -
Mal1g0197 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Mal1g0197 456 Gene3D - 357 442 IPR036063 -
Mal1g0197 456 SMART SMR_2 356 444 IPR002625 -
Mal1g0197 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Mal1g0197 456 Gene3D Tetratricopeptide repeat domain 106 354 IPR011990 GO:0005515
Mal1g0197 456 PANTHER OS02G0120000 PROTEIN 21 452 - -
Mal1g0197 456 TIGRFAM PPR: pentatricopeptide repeat domain 259 290 IPR002885 -
Mal1g0197 456 TIGRFAM PPR: pentatricopeptide repeat domain 228 258 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0197 122 302 Glycosyltransferase AT1G05670 27.624 1.29e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0197 - - cam:101506627 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0197 1 2237770 2239215 Mal1g0197 1 2237770 2239215 ECH