Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0183 ATGGCGAGTCCTCCGGAGGAGGTTAGGTTGGATCAACTCCCTCACGCTCTGCTTGCCACCATCATGACCAAACTCGACGTCGCTTCCATCTGTTCCTTGGCCACCACCGCCTCCACCTTCCGCTCTTGCGCTAAACACATCCTCTCCTTCCTCCCCAATTTTCATCTCATCGATACTGCGCCCTCTGGTGATTTGCTCTCACCGTTGTTGCCACCTAATCCATATCTTAAGAGTCTCAAGATTGATTGTTCTCGTCTTGATGATTCTGCAATCTCTCTTTTGCTGAAACCCTCTCTTCATGAACTTTCTTTGTATAATTGTTCGGATTTCAGCGGGAAACTTCTCTCTCAGATCGGGACTCAATGCAAGGATCTAAGGTCTCTTTACTTGGGTTCAGTTGCAGAAAAAAGAGGGAGGGCAATTCATATATCTGATCTGGAGGAGTTACTTACTGGTTGCTCTAACTTGGAAGTTTTGATTTTGATGTTTGATGTCTCTCTCTTTCTACGTCATAACTTAGCTCGAGTTTGGGCTTCTGCGTCTGAGAAACTTACTTCTCTTGAGATTGGATATATTTCTTCAGTTACAGTGATTGAACTGTTCAACTCAAATTTGGGACCTCATCAATCCATTAATCCTATTCAACCATCCATACTTCCTGGAATTCAAAAATTGTGTCTTTCGGTGAACTATATGACGGATGCTATGGTTACCACGATATCCAAAGGTCTCATCTTTTTGACCCATTTGGATCTTCGTGATGCACCATTTGTTGAACCAAGACTTACATTTGATCTAACCAACACCGGTCTGCAGCAAATTAATCAACATGGGAGATTGAAACATCTTTCATTGATCCGAAGCCAAGAGTTCATAATTTGTTACTTTCGAAGAGTAAGCGATCTAGGATTACTTTTAATGGCTGACAAGTGTGCAAACATGGAGAGCATATGTCTTGGTGGCTTTTGTCGTGTCACAGACACCGGAATCAAAACTATCCTCCATTCTTGCTCCCGTCTATACAAACTTAAGGTCACTCATGGGACTCAATTAACTGATCTAGTTTTTCACGATATCTCTGCAACATCCCTTACTTTAACACATGTGAGCTTAAGATGGTGCAAGTTGTTAACCAATCATGCAGTTCTTAGTTTGACATCAAACAAGGAACTTAAAGTTCTTGACTTGAGAGATTGCAGAAGCATTGGGGATGAAGCTCTCCGAGCCATTGGCATACTTTTGAGGCTAAAAATTTTACTAATTGATGGCTCTGATATAACTGATGCTGGACTTTCATACTTACGGCCGACCGTTATTAATTCATTATATGCATTGTCTCTTCGTGGGTGCAAGAGACTCACTGATAAATGCATAACAGTTCTATTTGATGGTTGTGGCAAGCTGGAATTAAGAGACCTGGATCTATCCAATCTTCCTAACCTCTCAGATAATGGAGTTCTACAGTTGGCAAAAAGCCGAATTCCTTTTTTGGATCTTCGAATGCGACAATGCCCTCTAATTGGTGATACCTCGATCATGGCATTAGCTTCAATGATGTTTGATGATGCCGGATGGTATGAAAGCGGTCTTCGCTTGTTGGATCTGTATAACTGTGGAGGCATTACGCCACTTGCTTTTCGTTGGTTAAAGAAACCGTATTTTCCGAGGCTTAAATCGCTGGGAGTGACTGGAAGTGTTAATAGAGACATGGTAGATGCTTTAGCTAGAAGTAGACCTTTCTTGTATGTGGCATGCAATGGTGAGGAACTTGGGCCTGACCCTTGTGATATGTCAGATGGCTTATATACACATGATTACGATGAGGTGGATGAATTTGAGCAGTGGCTTCTTGAAGCTGATGTTGATGAAGCTGATATTGATACTGATGATGAAGAAATGGGCGATGCTGAAAATGAAGAAGAACTGATCATGATGTAG 1938 0.419 MASPPEEVRLDQLPHALLATIMTKLDVASICSLATTASTFRSCAKHILSFLPNFHLIDTAPSGDLLSPLLPPNPYLKSLKIDCSRLDDSAISLLLKPSLHELSLYNCSDFSGKLLSQIGTQCKDLRSLYLGSVAEKRGRAIHISDLEELLTGCSNLEVLILMFDVSLFLRHNLARVWASASEKLTSLEIGYISSVTVIELFNSNLGPHQSINPIQPSILPGIQKLCLSVNYMTDAMVTTISKGLIFLTHLDLRDAPFVEPRLTFDLTNTGLQQINQHGRLKHLSLIRSQEFIICYFRRVSDLGLLLMADKCANMESICLGGFCRVTDTGIKTILHSCSRLYKLKVTHGTQLTDLVFHDISATSLTLTHVSLRWCKLLTNHAVLSLTSNKELKVLDLRDCRSIGDEALRAIGILLRLKILLIDGSDITDAGLSYLRPTVINSLYALSLRGCKRLTDKCITVLFDGCGKLELRDLDLSNLPNLSDNGVLQLAKSRIPFLDLRMRQCPLIGDTSIMALASMMFDDAGWYESGLRLLDLYNCGGITPLAFRWLKKPYFPRLKSLGVTGSVNRDMVDALARSRPFLYVACNGEELGPDPCDMSDGLYTHDYDEVDEFEQWLLEADVDEADIDTDDEEMGDAENEEELIMM* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0183 645 SUPERFAMILY F-box domain 3 46 IPR036047 GO:0005515
Mal1g0183 645 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 13 564 - -
Mal1g0183 645 Pfam Leucine Rich repeat 388 410 IPR001611 GO:0005515
Mal1g0183 645 Gene3D Ribonuclease Inhibitor 415 589 IPR032675 -
Mal1g0183 645 SUPERFAMILY RNI-like 279 563 - -
Mal1g0183 645 PANTHER UNCHARACTERIZED 13 564 - -
Mal1g0183 645 SUPERFAMILY RNI-like 39 345 - -
Mal1g0183 645 SMART LRR_CC_2 494 518 IPR006553 -
Mal1g0183 645 SMART LRR_CC_2 363 388 IPR006553 -
Mal1g0183 645 SMART LRR_CC_2 96 121 IPR006553 -
Mal1g0183 645 SMART LRR_CC_2 467 492 IPR006553 -
Mal1g0183 645 SMART LRR_CC_2 389 413 IPR006553 -
Mal1g0183 645 SMART LRR_CC_2 439 464 IPR006553 -
Mal1g0183 645 SMART LRR_CC_2 311 336 IPR006553 -
Mal1g0183 645 SMART LRR_CC_2 527 552 IPR006553 -
Mal1g0183 645 Gene3D Ribonuclease Inhibitor 52 414 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0183 - - pvu:PHAVU_007G016400g 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0183 1 2049839 2052521 Mal1g0183 1 2049839 2052521 ECH