LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja6g3247	ATGGCATCAATCACGCTTTCTTCTGATCCCTTTGCTTCAAAGACTCTTCCTATATCCTCTTCCAGTTACTGCATTCAGCTTGGGACATCAAGGATCTCTGCTCGTGCGTTGATCACTGGGAGAATTGAGCAAACCCATCTCAGATTGTCGACGGAACTGAGGAGAAATCAAGGTTTCACTTTAAAGGCTTCTATGGGGCCTCCAGGACTTACAGAACAACTTAATAACAGCAAGCTAGATACTTTAGCTGAAGCTGAAGATGAGTGTGATATATTTAATGATCTTAAGGATAGGTTTCTAAGTTTTAAGAAGAATAAATACATGAAAAACCCTGAGCAGTTTGAAAGTCTTGCCAAGGCTCAAGAACCAAAGTTCATGGTTATTGCCTGTGCAGACTCTAGGGTATGCCCCTCAAATGTTTTGGGATTTCAACCAGGAGAAACATTCACGATTCGCAATATTGCTAATTTAGTTCCTCCTTTTGTGAGAGGACCCACAGAAACAAATGCTGCACTAGAATTTGCTGTAAACACCCTTCAGGTTGAGAACATCTTTGTCATTGGCCACAGCTGCTGTGGAGGTATACGCGCCCTTATGAGTATGCAAGATGATGCCAGTGCAAGCTTTATAAAAAATTGGGTTGTTATTGGGAAGAATGCAAGAATAAAAACTGAGGCTGCTGCTTCCAACCTCAGCTTTGATGAGCAGTGCAGCCATTGTGAGAAGGAATCCATTAATCATTCCTTATTAAACCTACTTACTTACCCATGGATTGAACAAAAGGTGGCGAATGGAGAACTCATGATTCATGGTGGTTACTACAACTTTATTGACTGTTCATTTGAGAAATGGACATTGGATTACAGGGGAACCAAAGTGGATGGAAATGGCAGAATTGCTACCAAAAACAAAGCATTTTGGTGCTGA	927	0.4121	MASITLSSDPFASKTLPISSSSYCIQLGTSRISARALITGRIEQTHLRLSTELRRNQGFTLKASMGPPGLTEQLNNSKLDTLAEAEDECDIFNDLKDRFLSFKKNKYMKNPEQFESLAKAQEPKFMVIACADSRVCPSNVLGFQPGETFTIRNIANLVPPFVRGPTETNAALEFAVNTLQVENIFVIGHSCCGGIRALMSMQDDASASFIKNWVVIGKNARIKTEAAASNLSFDEQCSHCEKESINHSLLNLLTYPWIEQKVANGELMIHGGYYNFIDCSFEKWTLDYRGTKVDGNGRIATKNKAFWC*	309

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja6g3247	308	Gene3D	Carbonic anhydrase	83	292	IPR036874	GO:0004089\|GO:0008270
	Lja6g3247	308	PANTHER	CARBONIC ANHYDRASE	20	308	IPR001765	GO:0004089\|GO:0008270
	Lja6g3247	308	CDD	beta_CA_cladeB	98	284	IPR045066	GO:0004089\|GO:0008270
	Lja6g3247	308	Pfam	Carbonic anhydrase	126	277	IPR001765	GO:0004089\|GO:0008270
	Lja6g3247	308	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	173	193	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Lja6g3247	308	PANTHER	CARBONIC ANHYDRASE	20	308	-	-
	Lja6g3247	308	SMART	Pro_CA_2	118	285	IPR001765	GO:0004089\|GO:0008270
	Lja6g3247	308	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	130	137	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Lja6g3247	308	SUPERFAMILY	beta-carbonic anhydrase, cab	88	289	IPR036874	GO:0004089\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja6g3247	Lja-Chr6	60835821	60839058	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja6g3247	K01673		-	gmx:100811331	469.159

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja6g3247	6	60835821	60839058	Lja6g3247	6	60835821	60839058	ECH