Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3215 ATGGCTAAATATGGTGTGAAGACGTTGATATATTCTAGTACATGTGCAACATACGGGGAACCGGAAAAGATGCCCATTACAGAAGAAACGGAACAGAAGCCAATTAATCCATATGGAAAAGCCAAGAAGATGGCAGAAGATATCATCCTTGATTTTTCTAAAAATTCTAAGATGGCCGTAATGATTCTGAGATATTTCAATGTGATTGGATCAGACCCTGAGGGCAGATTAGGTGAAGCACCGAGACCTGAACTTCGAGAGCATGGTCGAATTTCAGGCGCTTGCTTTGATGCAGCTCGTGGTATTACATCTGGCTTAAAGGTTAAAGGAACAGACTATAACACCCCTGATGGAACATGCGTTCGAGATTATATTGATGTAACTGACCTGGTTGATGCTCACGTCAAAGCTCTTGAAAAGGCACAACCTGGTCAAGTTGGGATCTACAATGTTGGCACTGGAAAAGGAAGATCAGTGAAGGAGTTTGTGGATGCTTGTAAAAAGGCCACAGGGGTGAACATCAAAGTAGACTTCAATCCCCGCAGGCCCGGTGATTACGCTGAGGTTTATTGCTACCCGGCTAAGATCAGACGTGAACTGAATTGGACTGCACAACACACTGATCTTCAGAAGAGCATACAAGTTGCATGGAAATGGCAGAAATCGCGTCCTGGTGGTTATGGAGTATCATCTGCAATCTGA 702 0.4387 MAKYGVKTLIYSSTCATYGEPEKMPITEETEQKPINPYGKAKKMAEDIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGITSGLKVKGTDYNTPDGTCVRDYIDVTDLVDAHVKALEKAQPGQVGIYNVGTGKGRSVKEFVDACKKATGVNIKVDFNPRRPGDYAEVYCYPAKIRRELNWTAQHTDLQKSIQVAWKWQKSRPGGYGVSSAI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3215 233 Gene3D - 1 152 - -
Lja6g3215 233 PANTHER PINORESINOL REDUCTASE-RELATED 1 222 - -
Lja6g3215 233 Pfam GDP-mannose 4,6 dehydratase 8 206 IPR016040 -
Lja6g3215 233 Gene3D - 70 205 - -
Lja6g3215 233 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 225 IPR036291 -
Lja6g3215 233 PANTHER UDP-ARABINOSE 4-EPIMERASE-RELATED 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3215 Lja-Chr6 60591043 60593971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3215 9 219 Miscellaneous Gene Families AT4G00110 23.661 4.43e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3215 K12448 - gmx:100783060 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3215 6 60591043 60593971 Lja6g3215 6 60591043 60593971 ECH