Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3209 ATGGCAGCCACCACCAGAGCAATAGCCATAACCAGCAACTCCACATGCTCTCTACTTACCAAGAAGAAGCCCTTTGTTGGCTCCCAATCTACCCTTTGCCTCAATGTTTCTAGTTCCAGGACTACCAGGTCTTTTACCTGCAGAGCCATTTACAATCCTCAGGTTTTGCTCAAGGAAGAAGGCCAACCCCAATCCCTCGATTACAGAGCTTTCTTCGTCGATCAATCTGGCAACAAGGTTTCTCCCTGGCATGATATTCCATTGCAGTTAGGTGGGGGTGTCTTCAACTTCGTTGTTGAAATACCAAAAGAATCCAGTGCAAAGATGGAGGTTGCCACTGATGAGCCTTTCACTCCCATAAAACAGGACATTAAAAAGGGAAAGCTTCGATTTTACCCTTATAATATACATTGGAACTATGGCTTACTTCCACAGACATGGGAAGATCCATCTCTTGCAAACTCTGAAGTTGAAGGAGCATTTGGAGATAATGATCCAGTTGATGTGGTTGAGATTGGTGAGAGCCAGAGGAAAATAGGCGATGTTCTCAAGATCAAACCGCTGGGTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCATTAGATGATCCAAAGGCTTCACTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCAGGAACCCTCACAGCAATTAGGGACTGGTTCAGAGACTACAAGATACCTGATGGGAAACCCGCTAATAAATTTGGGCTCAGAAACCAGGCAGCAAATAAGGATTATGCGCTTAAGGTCATTACAGAGACCAATGAGTCCTGGAGTAGACTTATCAAGAGATCAATTCATGCTGGAGAGTTGTCACTTGTGTAA 873 0.4353 MAATTRAIAITSNSTCSLLTKKKPFVGSQSTLCLNVSSSRTTRSFTCRAIYNPQVLLKEEGQPQSLDYRAFFVDQSGNKVSPWHDIPLQLGGGVFNFVVEIPKESSAKMEVATDEPFTPIKQDIKKGKLRFYPYNIHWNYGLLPQTWEDPSLANSEVEGAFGDNDPVDVVEIGESQRKIGDVLKIKPLGALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLRNQAANKDYALKVITETNESWSRLIKRSIHAGELSLV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3209 290 Gene3D Inorganic pyrophosphatase 55 290 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja6g3209 290 SUPERFAMILY Inorganic pyrophosphatase 57 286 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja6g3209 290 Pfam Inorganic pyrophosphatase 97 274 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja6g3209 290 ProSitePatterns Inorganic pyrophosphatase signature. 163 169 - -
Lja6g3209 290 CDD pyrophosphatase 93 272 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja6g3209 290 PANTHER SOLUBLE INORGANIC PYROPHOSPHATASE 6, CHLOROPLASTIC-LIKE 32 290 - -
Lja6g3209 290 PANTHER INORGANIC PYROPHOSPHATASE 32 290 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3209 Lja-Chr6 60488723 60491554 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3209 K01507 - gmx:100787109 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3209 6 60488723 60491554 Lja6g3209 6 60488723 60491554 ECH