Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3200 ATGTCAAGGAGGCCAGTAAATCCTTCACGCCGGTTAGCTGATGGTGGAAGTATATCATTTGTGTCCTCTATCAAGGCTAAATCTCAGAACTCTCCTCTACTATCTATTGGGCTTGTTATAGTGGGTGCAATCCTCCTCATTGGTTTTATTTATAGCAGCTCAGGTGGATCTAGTGGTGATATTAAGGATGTAAGCAAACTTGAAGGTGGTGCATCATGCACTTCAGAAGTCCTACATGCATTGCCCATTTTGAAGAAAGCATATGGAGACAGCATGCGAAAGGTTTTGCATGTTGGCCCAGACTCTTGTTTGCTGGTACCGAGTTTGTTAGAAGAGGATACTGAGGTTTGGGGAATAGAACCATATGAATTAGATGATGTAAGTGCAAAGTGTAAAGGTCTTATACGCAGGGGCATTGTGCGTGTTGCTGACATTAAGTTTCCTCTACCCTACCGTGCAAAGTCATTTTCTCATGTCATTGTGTCAGATGCATTGGATTACTTATCTCCGAGGTACCTGAATAAAACCCTGCCAGAGTTGGTGAGGGTATCCACTGATGGTGTTGTTATCTTTTCAGGTTATCCAGGTCAGCAGAGAGCTAGAGGTGGAGAAGTGTCCAAATTTGGCCGTCCCGCCAAACTGCGGAGCGCATCTTGGTGGATAAGGTTTTTCGTTCAGACAGGATTAGAAGAAAATGAAACTGCTGGAAAGAAGTTTGCACAGGCTTCAGCCAAGAAGGCATACAAGCCAGCATGCCAAGTTTTTCACCTCAAATCATACCCCTGA 786 0.4427 MSRRPVNPSRRLADGGSISFVSSIKAKSQNSPLLSIGLVIVGAILLIGFIYSSSGGSSGDIKDVSKLEGGASCTSEVLHALPILKKAYGDSMRKVLHVGPDSCLLVPSLLEEDTEVWGIEPYELDDVSAKCKGLIRRGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPRYLNKTLPELVRVSTDGVVIFSGYPGQQRARGGEVSKFGRPAKLRSASWWIRFFVQTGLEENETAGKKFAQASAKKAYKPACQVFHLKSYP* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3200 261 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 261 - -
Lja6g3200 261 Gene3D Vaccinia Virus protein VP39 72 255 IPR029063 -
Lja6g3200 261 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 261 IPR044689 GO:0008168|GO:0045488
Lja6g3200 261 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 232 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3200 Lja-Chr6 60421087 60425890 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3200 K23871 - gmx:100800870 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3200 6 60421087 60425890 Lja6g3200 6 60421087 60425890 ECH