Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2789 ATGGAAGAAGAAGAAGCACCATTTCACGGTGGCGACGATGATGATTTCGGCCAACTCTACCTTGAAGAACCACTCCCTCAACAACAACAACGAGAAGCAGAAGAAGAAGAAGCCGATGCTAACAGTAACCACGCCAATGAAAATGTTGCCATCGAAAGCAGCGACGACGACGACGATGATGATTTGAACATCGTCTTAAACGACGACGGATTCGACATTGACGACCGCGATGCTTCCACATTTGTTCATAATCCCCAGCATTTGAGGACTCAAGGTCAAGGAGGATCGTTGTTTGCGAATAATCAGATGAAGAAGTCGAATCCCTCCTCCATGGCAATGCCTTCCTCCTTCAATAACATGACATCAAGTCATTTGTATGCTGCTGCACCCAATCCAATGGTGTCGCATCAGGGTGGATACTCATGGTTTCTTCCTTCGTACTGGAGTGCATTTAATGTAAATGTTGATGCTTTAAAGGAGAAGCCATGGGTGTTTTCTGGAGTTCACAAAACTGATTACTTCAATTATGGTTTTGATGAGACCACTTGGAAGCTATACTGTACTTCATTGGAGCAACATTGGCGAGCATCCACACAAACTGGTATTTCTGTTGACGGGTCTGCGAAATTGAATAAGCCAAAAGGAAAAGCAATACGAGTTGAGGAAAGCATGGGTGAACGCCAACCATCCATACACCTAAGGCGTCCAGTCAGCAGGGATTCTGATGTTGTTATAGAGATCAAGGTGCTTGAGTCCTCTGATGATCATTCTGGTTCTGGCAACAGCACCGTAGTGGATGCATCATTAGAAGTGGAATCTATTGTAGGCAAGAACAAGAATATTCTCAATTATTTCACTGAATGTGATGATGTGCTGTCTGAAGATCAGTTGGAAGACGTTAAAAAATCAGATGAAATTTCTCTTCAGGAAAGAACTAGCCTGATTCCTGGTGTAAATGAAGATGGGCATCAGGATCAAGCTGACCATCTTGCCGAAGATACTGCAGAAGTTTCAGGGAAAGAAATAAAAGCAGAGGAGAATGGTGGCATGGACGCATGCAGTCCTTATTCATGCTGGAATGAACCAGAGTTGTCACTTGGTGATCATGAGCATAGCCTGACTTCCTATACTGATAGTGATTCCGAGGGAACACAAAACAGTGTACATGTTGATGATGAGAAAAGTCTTGTCCCTGAAAGAAGGCAATCAATCAATTCCATCACTGATTTGAAGGGCAAGTCTTTGCCACTTTATTGTGAGAACTCCAAGAATAACAGTTTCAGCAGAAAAGCAGTAAATGTAGCTTACAATTCAAGAACTAGAGTTCCACATAGAAAGGAATGGAGGCATCGAAGTGGTAGGCATGAGGGTGGTTTGAATCTGAATAAGCACAATGAAAATGATAATCATGTTTCCTCTATCCTCATGTCTGGTGCAAGGGATCTGTCTCAGTTGGGTAGTCAATTTGTTGATTATGGTAGTAGACATAGAGAGCAACTACAAGGTTTTGGCAGTCATAAAAGAAGAGATGTTTCATATACTAGGGAAACTAAACAAACCTGCTATTATGGGGGTGAAAAGGCTGTTGATGACCTGGTTCAAAGAGACCACTCTAAATATTCATATGAAGAAGGTCGAGTCCGGGATAAAACAAACCGATATTACAGAAAAAATTGGGGTGTCAGGAATTATTTTTCTAAACCAGGTTCTCGGATGGCACGTTACGAGGACAGGGAGAGAGATCATTATCATGATGGTTGGGGGTATGCTGCTGATGACCTGAACCCTGACTCTTGTAGGGAGTCAATGCTGCTTCTTCCAAAACATTCATCCTTTCCTCACCAGGAGAGGGACACTCAAAGGGAAAGAATAAATGACAAGTCCTACTTTAGAGACAGAAACTACAATGACGATTTTGATGAATGTGAGATTGAATTTTCAAACAAAAGCTATAGAATGTCTCCTTATTCTGCTGAGATAGAAATGGAATATTTAAATAATAAACGCGATGAGCAGTTTCTACATACTGATAGAGATTGGAGAGGATCTGTCCGAAGGGTAAAACATCGTGGCGAGCCTCCTCTTGTTTTGGATAACCTGTGGTCTGGGAAAATGGATGAAAAATGTCAGGCATATACACATCATCAGAACTCAAATTTTAGGTATCGTAGACAATCTACACACTCAGTGAGAAATGTTTGTGGAGCAAGAGTGAAAGAAAATTTTGAGTATCATACCCATGCTGCTGAAGATGAAGATTTCATGCTTTATCCTGTAGAAGAGTATCAGTGTTATAGGTCCTCATCTAAGTTCCAGAACTGCACTGAGGAGGAACTTGTTTTTAGGCATCATGAAACTCATGCAACATCTCTGCAAGATGACATGCAAATTGATGATATAAAATTGCGGCAGCATCAGCTAAATATGCCAAGGAGAAATAACAATGGTTTTAAAAGCTCTAAGGTCATATGCAGAAGTAATCTTAGGCAAGCAGCGCTGAGATGCAGGAAATCAGTTGATTTGGTTAACGGGGAAGGAAAGTCTCAGGCAAGAAGTTCCGGAATCTTTTGCAGTGGTAGGCTTCAATTTGTCGATGAAGGGATTGCTAAGAAGCCAAGAGCTTCAGTGGGTCTTGCTGAATCTCGTAAAAAGGCCATTACATTCGAAACCTCAAAGTACGAGAGCAACCTTGAAAATAAGAAATGTCTTCAAAACCTTCAAGATAAAGGGCATAAAGAAAGCTTGGATATTGAGGAAGGTCAGGTTGTACCAGAAGAACTATTCACAGTGTCTTCTGTATCCAGAAAAGATGTTTCTGAAGGTGCAGCAAAGTCACAGCATGAGAATAATTCTGACCAGTTTATAGGTGGTTATGACAATCAAAGGATTCTTGATTCATTAGCTAAGATGGAGAAACGTGGGGAGCGCTTCAAGCAGCCCATTACACTGAAAACAGAAGCAGAAGAAGAGGGTTTGAAGCTCAACAATGACTCAGTAGATGCCGGTGAAGCGAAGCAACATAGACCAGCTCGAAAGAGGCGCTGGGTTGGTAGCTAG 3057 0.4177 MEEEEAPFHGGDDDDFGQLYLEEPLPQQQQREAEEEEADANSNHANENVAIESSDDDDDDDLNIVLNDDGFDIDDRDASTFVHNPQHLRTQGQGGSLFANNQMKKSNPSSMAMPSSFNNMTSSHLYAAAPNPMVSHQGGYSWFLPSYWSAFNVNVDALKEKPWVFSGVHKTDYFNYGFDETTWKLYCTSLEQHWRASTQTGISVDGSAKLNKPKGKAIRVEESMGERQPSIHLRRPVSRDSDVVIEIKVLESSDDHSGSGNSTVVDASLEVESIVGKNKNILNYFTECDDVLSEDQLEDVKKSDEISLQERTSLIPGVNEDGHQDQADHLAEDTAEVSGKEIKAEENGGMDACSPYSCWNEPELSLGDHEHSLTSYTDSDSEGTQNSVHVDDEKSLVPERRQSINSITDLKGKSLPLYCENSKNNSFSRKAVNVAYNSRTRVPHRKEWRHRSGRHEGGLNLNKHNENDNHVSSILMSGARDLSQLGSQFVDYGSRHREQLQGFGSHKRRDVSYTRETKQTCYYGGEKAVDDLVQRDHSKYSYEEGRVRDKTNRYYRKNWGVRNYFSKPGSRMARYEDRERDHYHDGWGYAADDLNPDSCRESMLLLPKHSSFPHQERDTQRERINDKSYFRDRNYNDDFDECEIEFSNKSYRMSPYSAEIEMEYLNNKRDEQFLHTDRDWRGSVRRVKHRGEPPLVLDNLWSGKMDEKCQAYTHHQNSNFRYRRQSTHSVRNVCGARVKENFEYHTHAAEDEDFMLYPVEEYQCYRSSSKFQNCTEEELVFRHHETHATSLQDDMQIDDIKLRQHQLNMPRRNNNGFKSSKVICRSNLRQAALRCRKSVDLVNGEGKSQARSSGIFCSGRLQFVDEGIAKKPRASVGLAESRKKAITFETSKYESNLENKKCLQNLQDKGHKESLDIEEGQVVPEELFTVSSVSRKDVSEGAAKSQHENNSDQFIGGYDNQRILDSLAKMEKRGERFKQPITLKTEAEEEGLKLNNDSVDAGEAKQHRPARKRRWVGS* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2789 1018 MobiDBLite consensus disorder prediction 975 1007 - -
Lja6g2789 1018 PANTHER FIP1[III]-LIKE PROTEIN 12 1018 - -
Lja6g2789 1018 PANTHER FIP1[III]-LIKE PROTEIN 12 1018 IPR044976 GO:0006397
Lja6g2789 1018 MobiDBLite consensus disorder prediction 1 63 - -
Lja6g2789 1018 Pfam Fip1 motif 153 192 IPR007854 -
Lja6g2789 1018 MobiDBLite consensus disorder prediction 975 1018 - -
Lja6g2789 1018 MobiDBLite consensus disorder prediction 442 466 - -
Lja6g2789 1018 MobiDBLite consensus disorder prediction 369 396 - -
Lja6g2789 1018 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2789 Lja-Chr6 56984016 56991084 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2789 - - lja:Lj6g3v1915870.1 2018.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2789 6 56984016 56991084 Lja6g2789 6 56984016 56991084 ECH