Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2788 ATGAAGATGACCTTCACAAAGTCTTGTCACTTATTCTTCCTGTGCTTCATAGTGCCCCTTCTTGTATTCAGTGATGTGGAACTGCCTCAAGGTCCTAAAACTCACATTCTGCATGCTTTCCATGAAGGCAGAAACGGGTCCATAACAGTGTCAGTAAAAGCAGAAGAACATGCACACTCCACCTCCAGCAAAATTTGGTTGCATGGTTCTTGCACAAAAAGAGACATAAGTATATCACAAAGCAGAGGTTCTACATCTGGAATTCCTCAGTACATTGTGCAGATTGTCAACACATGTGTTTCTGGATGTGCTCCTCATGACATTCACCTCCATTGTGGCTGGTTTGCTTCAGCAAGAATCATCAACCCCAGAGTGTTCAAGAGACTATCCTATGATGATTGCTTGGTCAATGGAGGGAACCCTTTAGAATCAAGTCAGATCATCAGATTCACTTATTCCAATTCCTTCATGTATCCACTTGCATTCAAGTCTGCTCAATTTTGCTGA 507 0.4221 MKMTFTKSCHLFFLCFIVPLLVFSDVELPQGPKTHILHAFHEGRNGSITVSVKAEEHAHSTSSKIWLHGSCTKRDISISQSRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSAQFC* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2788 168 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 30 168 IPR040361 -
Lja6g2788 168 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 30 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2788 Lja-Chr6 56978779 56979546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2788 - - aprc:113852241 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2788 6 56978779 56979546 Lja6g2788 6 56978779 56979546 ECH