Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2787 ATGCTGGGAATGGCTCTGAGATGTTTCTGCGCCCCAGATATTCCAACTCAGTACCAAAACCATGTGAAATTGGAACAGAGAAGCAGCAATAAGAAGTGTCTTCAGAATGTGAAGAGTCTGGTCAACACTATTGAGCTTCCATCCATTTCATCTTCTCCACTTGAGTCTCTTCAGAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAGAAATCTCAGTTTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGCGCTGCTGATGCTTCGGTTGTCAGCGCTGTGAATGAAGGAATTGAAGCTGCAAGAGATATATTATGCATTCGAAGGCCGTGGGTGATGATCAGTGTCAATGATGACAAAGACCTTCACTTTCGTAAGGCTGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCTAATGCAATATCATTCCAACGAAAACCTAATGTTGGAAATATGATGTTGGAAAACCTAAAGGATGGAGTCATCACTGAACGCTGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATTAGAGAGGTAACATATGTTAGAGATGCTATCACAACTGCTGATCTCATCAAAAGAAATGATGTTGATGCTATGGAGATACACACAAGTGGGAGGCAGAGTACACTGTTCGAAGAACTCTGGTATGCTCTAGGAGACACAGTACAAAATTTGAAGCTAATAGCAGTTAGCTTACCTAATAATGGGGATTCAACAATATCCTCCATGAACAAAATGTTCTCTATTATGAAACCCAGTCTTCGAGGCTTCAACTTATGGCAGTTAGATGGCCGTCCCATGAGTGGAGATATTGGGAGAGGAGCCACTAAGGAATCAATTGTGTTTGCTGCTCATTTGACTAAAGCAAAAGATAGACCTCCAGGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATAGATGGGTTGAAAAAAGAGGGACTCTTTCAAACAACTATAACCGAGTACCTAGATGATGAAATGTCAACAATCAGCTCATCTAATTCATCACATGTTTTAATTAGTGGCATAGCTTACGGTGGCTACGCACGGAAGATTGTTGGTAGAGTATTGCGATCCATGCAGACCCAACATGGTGGAGCTGCTTCGATTGAGGATCATCCGGAGCATCTCTTGATGGCTCTTAGGGAAGCACTTGCATTGGTTGGACCTGTTAAAAATGTCTGTGATCCATGA 1278 0.4304 MLGMALRCFCAPDIPTQYQNHVKLEQRSSNKKCLQNVKSLVNTIELPSISSSPLESLQRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDILCIRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAISFQRKPNVGNMMLENLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTADLIKRNDVDAMEIHTSGRQSTLFEELWYALGDTVQNLKLIAVSLPNNGDSTISSMNKMFSIMKPSLRGFNLWQLDGRPMSGDIGRGATKESIVFAAHLTKAKDRPPGFLQLAGGTNAHTIDGLKKEGLFQTTITEYLDDEMSTISSSNSSHVLISGIAYGGYARKIVGRVLRSMQTQHGGAASIEDHPEHLLMALREALALVGPVKNVCDP* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2787 425 SUPERFAMILY 4Fe-4S ferredoxins 125 211 - -
Lja6g2787 425 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 186 197 IPR017900 -
Lja6g2787 425 Gene3D - 142 218 - -
Lja6g2787 425 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 135 166 IPR017896 -
Lja6g2787 425 PANTHER ATP-BINDING CASSETTE SUB-FAMILY E MEMBER 1 18 417 - -
Lja6g2787 425 Pfam Iron-Sulfur binding protein C terminal 216 417 IPR021039 -
Lja6g2787 425 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 177 206 IPR017896 -
Lja6g2787 425 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 18 417 IPR013283 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2787 - - gmx:100804088 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2787 6 56951809 56955595 Lja6g2787 6 56951809 56955595 ECH