Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2782 ATGGAGGGTGCAGAAGAAGGAGTGGAGATGATGCTGGATTCCAAGGACATGCAGCAGCAGAGCAAAGCCTTCGACAAGCTCACTGACCGCGTCGAGGATCGCCAGCTCGATTCCACTCGCGTCCAAGAGGCCATGGCTTCCATTGCTGCATCTGCTGAAGCTGATTGGAACGCCATGCGAATGAGGGAGAAAGAATTAGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATCGCAAATGAACTTGAGTTGGACAAAAAGGTGGCTGAAAGAACCTTGCGTGAGCATAAAGGTGATGCAGTTGCTGCCATCAGGCACTTGCTTCGCTAG 333 0.5015 MEGAEEGVEMMLDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMRMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2782 110 MobiDBLite consensus disorder prediction 1 30 - -
Lja6g2782 110 CDD UBA_HYPK 69 109 IPR038922 -
Lja6g2782 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Lja6g2782 110 Gene3D - 70 108 - -
Lja6g2782 110 Coils Coil 80 100 - -
Lja6g2782 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 109 - -
Lja6g2782 110 PANTHER BNAA05G30770D PROTEIN 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2782 Lja-Chr6 56914137 56916573 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2782 - - gmx:100789285 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2782 6 56914137 56916573 Lja6g2782 6 56914137 56916573 ECH