Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2760 ATGGCTCGGAAGGATAATCAACAGAAGAATGGACCGAATCACAAAAAAGGGGTTTCTGGGGGTGTCCTTCCGGGGGTGAAAGGCGGTCATGCTAAAGGAGGGCGGGTGAAGGTATTTCCGGGAGAGGATCTCGCGAATGGCGACCGGCTGAATCCTTGTGAAGCTAGTTCTGCTGGTGATAACAATAACAATGAGCAAAAATCTGAGAGTTTTTCGTCGAAGGAAAAGCAAGGGGTGTTTGCTAAGCATGGCATGGAGGAACCATTGTCCTTTGGGAGTAGTTCACGGGATGGCAGTGTGAATCCTGATGTTCCAGTACAGGAAGTAAATGGGAGTTTACCTAGAAATAATCAAGGTCAACAGAGTTTGAAGAGTAGATTGAGCTATTTACTCGAAGGTTCGCACATGAGAAGTATGGTAGAAAATTTAGAGCTTGCTGATAATGTGATGATTAGGAGATTAAGGTTGACTGCATCTTCTATTTTCACAGCAGCTAACGAGTGGCTAACCAAGCAGAAGCCATTGTTTGAATCTTGTAGATCCTCCATTTTAAAAGCTCGTGATAATATTAGAAAGAAAGTTGAGCTGGCATATCCCATTGTTCTGAAGTGGCTCATGCATTTTGGGAACATAGTGCTCCTATTGTCGTTGTTTTGGTTGGACTGTGCCTTTCGGGGTATTGATTCATTTGTACGAATGGGCACAACATCCTTCTTCTCTGTTATATGGTGCAGCATATTCTCGGTGATTAGTATGATTGGGATGCTCAAGTTTCTTGTTGTCCTGGGCCTGGCTGTTTTGATTGGAATTTTTGTTGGGCTCACGCTTGCAATTTTGGTAGTTGCGTTCCTTGGAGTAGTTATCTTGTGGTTTTATGGTAGCTTTTGGACAACTGCATTTTTCATCTTTCTTGGAGGATTGGCATTTATGTTAAAGCATGAACGTATAGCACTACTTATCACCACCGTGTATTCTGTCTATTGTGCTTGGCTGTACGTTGGGTGGCTTGGTTTGCTAGTGGCTTTCAATTTAGCTTTTATATCAAGTGACGTTCTGATATACGTCCTCAAGAAAAGCATAGATCAACAGAGCAGATCCAATTCTTTTGAGCAAAGAGCTGGAATGCACGGCCAACCAGGTTTCGCAAATGATGAACCAATGCAGGCTTCTTCCTCTGAAAATGGGCCGGGGCCATCTTCTGATCGTAATGCTGGAGTCCCATCAACTAGCGGGGTTGATTCTGAAGATGAAATTGTCCGATTGTTGAACTGCTCTGATCACTATTCAGCAATGGGCTTTACGCGATATCAAAATATAGATGTTTCAATACTGAAGCGGGAATATAGGAAAAAGGCAATGCTAGTACATCCTGATAAAAATAGCGGTATTGAAAAGGCTGCAGAAGCCTTTAAGAAACTTCAAAATGCGTATGAGATTCTAATGGATTCCTTGAAGCGTCAAGCGTATGATGATGAGCTAAGGAGAGAAGAGCTTTTGAGTGTATTTCACAGATTTCAAAATGCTTCCAATAAGAATGGTAGACATGGATTCTTTCCATCAGGATTTCCTCGGTCAGATGCGGATGCTGAGGATCCATTTGGTGATTCGAGGAGAATAGCTTGCAAAAGGTGTGGTGGCTTTCATGTCTGGATACATACCAAGAAACAGAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCCAGCCAAGGATGGTGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTTGATGTTCCTTCTGCTTTCGTGTGTGCTGACAGCAGAATATATAATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCAAATACTCATAAGCCAAGTTTCCATGTAAACACCAGTTTAGTGTCCAAGAGTAGTTCTGGTAAAGGAGCTAGTTCAGGTCAAAGAGGTGGGCGGATGCCAACACCTAATATGGAAGAAACCATGACAGAGGAAGAATTCTTTGAGTGGTTACAGAATGCAGTACAGACAGGCGCGTTTGAGAATTTCAATGGGAGCTCTGCAACAGAGAACCCAAATGCCAAATCTGGGAATGAGATGAAAAATCCTGGCAGTGGTAGTGGCAGCGGCAGCAAGAGAAAGAAAAAGGGGAAAAAGCAATGGTGA 2172 0.4314 MARKDNQQKNGPNHKKGVSGGVLPGVKGGHAKGGRVKVFPGEDLANGDRLNPCEASSAGDNNNNEQKSESFSSKEKQGVFAKHGMEEPLSFGSSSRDGSVNPDVPVQEVNGSLPRNNQGQQSLKSRLSYLLEGSHMRSMVENLELADNVMIRRLRLTASSIFTAANEWLTKQKPLFESCRSSILKARDNIRKKVELAYPIVLKWLMHFGNIVLLLSLFWLDCAFRGIDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLVVLGLAVLIGIFVGLTLAILVVAFLGVVILWFYGSFWTTAFFIFLGGLAFMLKHERIALLITTVYSVYCAWLYVGWLGLLVAFNLAFISSDVLIYVLKKSIDQQSRSNSFEQRAGMHGQPGFANDEPMQASSSENGPGPSSDRNAGVPSTSGVDSEDEIVRLLNCSDHYSAMGFTRYQNIDVSILKREYRKKAMLVHPDKNSGIEKAAEAFKKLQNAYEILMDSLKRQAYDDELRREELLSVFHRFQNASNKNGRHGFFPSGFPRSDADAEDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHPAKDGDGWVEQSSQPFLFGLLQKVDVPSAFVCADSRIYNATEWYICQGMRCPANTHKPSFHVNTSLVSKSSSGKGASSGQRGGRMPTPNMEETMTEEEFFEWLQNAVQTGAFENFNGSSATENPNAKSGNEMKNPGSGSGSGSKRKKKGKKQW* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2760 723 Coils Coil 463 483 - -
Lja6g2760 723 MobiDBLite consensus disorder prediction 683 711 - -
Lja6g2760 723 SUPERFAMILY Chaperone J-domain 421 506 IPR036869 -
Lja6g2760 723 MobiDBLite consensus disorder prediction 1 121 - -
Lja6g2760 723 MobiDBLite consensus disorder prediction 380 412 - -
Lja6g2760 723 MobiDBLite consensus disorder prediction 635 663 - -
Lja6g2760 723 ProSitePatterns Nt-dnaJ domain signature. 470 489 IPR018253 -
Lja6g2760 723 SMART dnaj_3 425 485 IPR001623 -
Lja6g2760 723 Pfam DnaJ domain 426 490 IPR001623 -
Lja6g2760 723 CDD DnaJ 426 482 IPR001623 -
Lja6g2760 723 MobiDBLite consensus disorder prediction 683 723 - -
Lja6g2760 723 Gene3D DnaJ domain 416 509 IPR036869 -
Lja6g2760 723 MobiDBLite consensus disorder prediction 384 410 - -
Lja6g2760 723 PRINTS DnaJ domain signature 465 485 IPR001623 -
Lja6g2760 723 PRINTS DnaJ domain signature 448 463 IPR001623 -
Lja6g2760 723 PANTHER OS03G0832900 PROTEIN 1 723 - -
Lja6g2760 723 PANTHER OS03G0832900 PROTEIN 1 723 - -
Lja6g2760 723 Pfam Cleavage inducing molecular chaperone 536 633 IPR032843 -
Lja6g2760 723 ProSiteProfiles dnaJ domain profile. 426 493 IPR001623 -
Lja6g2760 723 MobiDBLite consensus disorder prediction 635 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2760 Lja-Chr6 56710661 56716657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2760 1 694 Miscellaneous Gene Families AT5G49580 51.348 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2760 K09534 - gmx:100789594 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2760 6 56710661 56716657 Lja6g2760 6 56710661 56716657 ECH